Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g1407 ATGGAAGAGAAAGAAAGGTGGATTCAGAGCTACCATGTTTGTTTTTGGAAACTTGGTGGCGCTCAAGTTGCGACAGAAATCGGTTGGAGCGAGTTTGCGATTTCAATGTTTTCACTAGGAATGGTACATTATTTGCAGGCCAGGACTGTTCAAGAAAATATAAAAAGAAAAACTGCAATAAAGAAGATGGACATGAAAGCATCAAAAGAATTTTTTGCCGAGCTTAAGGTGTTAACGCGTGTTCATCACTTGAACTTGGTAAGGTTGATTGGATATTGCATGAAGTTGATTGGATATTGCATTGCCGGAATGGACTTGTCTCTTACAATATTGAAAAATGCACACACTGCTAGAGAACTAAAAATGCACGCCAAAATTGGACTATACTTTTGA 393 0.3817 MEEKERWIQSYHVCFWKLGGAQVATEIGWSEFAISMFSLGMVHYLQARTVQENIKRKTAIKKMDMKASKEFFAELKVLTRVHHLNLVRLIGYCMKLIGYCIAGMDLSLTILKNAHTARELKMHAKIGLYF* 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g1407 130 Gene3D Phosphorylase Kinase; domain 1 22 109 - -
Psa1g1407 130 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 55 95 IPR044812 GO:0019199|GO:0045087
Psa1g1407 130 SUPERFAMILY Protein kinase-like (PK-like) 55 95 IPR011009 -
Psa1g1407 130 Pfam Protein tyrosine and serine/threonine kinase 40 96 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g1407 Psa-Chr1 95494629 95496413 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g1407 32 95 Receptor kinase-like Gene Family AT3G21630 59.375 5.81e-18 77.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Psa1g1407 PK_Tyr_Ser-Thr 1.5e-06 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g1407 - K13429 nnu:104594072 74.7146