Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g1400 ATGAAGATTTCAAGTTTCGAGAAACCGACTGTAGGATATGCACTTGGAAATAATAGGATAGGCCGGTGGAGAGCGGAAGAGATGCATTACTATGCGCTTATGTCAAACAGTACAGTCCTAGGGAATGGAACCTTCACCTCCTCCGTGGACGCATCCTGTACGAGGACTGGACAATGCGCCTCTTGTTCTTGGAACGTAGCTCCTCAAGGTGCTGTTCTATTTTTCGACGAAAACATGGTGATGTCTGATTTGGTAGATTGCTGTAAGGAGTTGGAAGAAGGGCATCATGCATTGGCAGCACATAAGAAAGAGGTGGCATGGGGGTTAAACCGAGTGGAGCTGCCGTTGGAGTCGGAGGAAAGCAAGTTTAAGGAGGGAGAAGATGGAGGAAATCGAAGCGAAGATAAAAGCTTTGGGGGAGGAACAAGCATCTGCCATTGGATAGAATTGAAGGAGAATATAGAGAACACGGAGGCAACAGATGCAAGCGAGCAACTGAGATCTGAAGCAGTTTATGTAATCAAGGAGCTTGATACCGCAAATGTGAATGTGATGGAATGTATGATCAAGATTATTTCGAGTACGAAGATTGTAAAGATGCTGGTTGACAGAAAGTTTCCACCGTGGGCAATTCCTGTTGGATTCCTCTCTATAGATGGGAATGAAAGCTATGCTGGCCTTTGTACAATTGCACAGAATAACTTCAAAGAAATGAACATAATTCAGAACTTTGAACAAGTTGCCATATTGGTCCTTAAGTCATTGGATGAGCAGAACAACAGAGTACTTTGGGCTACTATGCATGCCATTGGCGATTGA 819 0.442 MKISSFEKPTVGYALGNNRIGRWRAEEMHYYALMSNSTVLGNGTFTSSVDASCTRTGQCASCSWNVAPQGAVLFFDENMVMSDLVDCCKELEEGHHALAAHKKEVAWGLNRVELPLESEESKFKEGEDGGNRSEDKSFGGGTSICHWIELKENIENTEATDASEQLRSEAVYVIKELDTANVNVMECMIKIISSTKIVKMLVDRKFPPWAIPVGFLSIDGNESYAGLCTIAQNNFKEMNIIQNFEQVAILVLKSLDEQNNRVLWATMHAIGD* 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g1400 272 PANTHER PROTEIN ROUGH SHEATH 2 HOMOLOG 69 122 - -
Psa1g1400 272 PANTHER TRANSCRIPTION FACTOR AS1 69 122 IPR031055 GO:0005634|GO:0006351|GO:0010338
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g1400 Psa-Chr1 95386586 95389203 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g1400 77 121 MYB Transcription Factor Family AT2G37630 62.222 5.72e-12 63.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g1400 K09422 - gmx:100819082 91.2781