Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g1399 ATGGCGACTCCACCGGTGGTCAGATTTCCGATCTTCGCAACGGTTAGAGCGATTGGAGTTCTCGTCATTCTGTTACTTTTAACGTGGGTTCTTCATTTCAGGGGAGGTCTCGCTCTCTTTTCCGATAACAAAGATCTCATCTTCAATGTTCATCCGGTGTTGATGGTGATTGGGCTTGTTCTAATCAATGGTGAAGGGATGCTTGCCTACAAGACAGTATCCGGAACTAAAAACTTCAAAAAAACAGTTCATCTGGCATTACAGTTTCTTGCTCTCGGTTTGAGCATAATTGGTCTCTGGGCTGCTTGGAAGTTTCACAATGACAAGGGCATTGACAATTTCTACAGCCTGCATTCATGGTTAGGCCTTGCATGCCTTCTCCTCTTCTTCATCCAGTTGGCTGCTGGATTTGCAACATTTTGGTATCCAGGAGGGTCAAGAAACAGTAGAGTTGCACTAATGCCGTGGCATGTATTCTTTGGTACCTATATCTATGCTTTGGCTATAGCTACAACAACTACTGGTCTTTTAGAAAAGGCTACATTCCTTCAAACCAACAACGTCATATCTCGATATTCCAATGAAGCAATTCTGGTCAATGTCTTAGGCATTTTGATTGTTGCTTTAGGTGGCTTTGTTATTCTTGGTCTCGTTACGCCGACTTTTAATAAAGCTGATGTTTTAAGAGGAAATGAATAA 699 0.422 MATPPVVRFPIFATVRAIGVLVILLLLTWVLHFRGGLALFSDNKDLIFNVHPVLMVIGLVLINGEGMLAYKTVSGTKNFKKTVHLALQFLALGLSIIGLWAAWKFHNDKGIDNFYSLHSWLGLACLLLFFIQLAAGFATFWYPGGSRNSRVALMPWHVFFGTYIYALAIATTTTGLLEKATFLQTNNVISRYSNEAILVNVLGILIVALGGFVILGLVTPTFNKADVLRGNE* 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g1399 232 Pfam Eukaryotic cytochrome b561 50 182 IPR006593 -
Psa1g1399 232 Gene3D - 1 230 - -
Psa1g1399 232 ProSiteProfiles Cytochrome b561 domain profile. 14 218 IPR006593 -
Psa1g1399 232 CDD Cyt_b561_ACYB-1_like 41 184 - -
Psa1g1399 232 PANTHER B561, PUTATIVE-RELATED 5 231 - -
Psa1g1399 232 PANTHER CYTOCHROME B561-RELATED 5 231 IPR043205 GO:0016491
Psa1g1399 232 SMART 561_7 50 176 IPR006593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g1399 Psa-Chr1 95354427 95357384 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g1399 1 228 Chloroplast and Mitochondria Gene Families AT5G38630 69.298 1.58e-113 323
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g1399 K08360 - gmx:100787570 380.563