Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g1397 ATGGATCCTCCACGCCGAGCACCACGCACAATAATCGACCCCGTCCCTAAATTCCGTCAAGTCGGTTTCTTCGCTCCCGGAGCCCCACCCGATCGCTCTCTCTCGGGTCCACCCGACCCGACTCACCCTTCTCACCCTATCGCCGATACATCCGCTTCGCTTTCACCTGTTATGATCCCTCCGCCGCGTCATCTTTCTGATAACCTAACTCTTCACGCTCGTTCCGCCGCGGTACCTCGCCGTGCTGAGTCGATTACTGTTGGTGGAAGTAACTCTGATGCTCCTGTTTCGCCGGCGCCGTCGTCTTCGTATTCGAGTAGGGTTGTTGTAGGTGGTGACAGAGGGTTTTTTGATGGGAAGGGGAATGATGCTGGGAAGGTTGTGGCGTCTTCGTTTCCGAGAGGTGGATTTGATTTGACGGCTTTGAAGGGAATGGTGCTGTTGTTCGGCGAAGTGGGTGACGTACTGTTCTGTTGTTAA 480 0.55 MDPPRRAPRTIIDPVPKFRQVGFFAPGAPPDRSLSGPPDPTHPSHPIADTSASLSPVMIPPPRHLSDNLTLHARSAAVPRRAESITVGGSNSDAPVSPAPSSSYSSRVVVGGDRGFFDGKGNDAGKVVASSFPRGGFDLTALKGMVLLFGEVGDVLFCC* 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g1397 159 PANTHER TRANSLATION INITIATION FACTOR EIF-2B 1 147 - -
Psa1g1397 159 MobiDBLite consensus disorder prediction 1 54 - -
Psa1g1397 159 MobiDBLite consensus disorder prediction 85 100 - -
Psa1g1397 159 MobiDBLite consensus disorder prediction 80 100 - -
Psa1g1397 159 PANTHER TRANSLATION INITIATION FACTOR EIF-2B DELTA SUBUNIT 1 147 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g1397 Psa-Chr1 95347765 95351353 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g1397 15 140 Eukaryotic Initiation Factors Gene Family AT1G48970 37.908 1.82e-08 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g1397 K03680 - gmx:100775998 147.902