Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g1393 ATGTCTTCTTCTTCAGAAGGTTACGCGATCGAGCTCTACATGGATCCCGCGCTCGAAAACCAAGTTCTGAAAGCCTGGAACGTTCTCGCCCGACGCCAAATCAGCACCGAGTTAATCGAAATCGGGTCACGGCCACACATCACACTCTTCTCAACTCCTTTCCTTCTAGAACCTTCCAAACTCGAGTCACTTCTCAAATCCCTAACTTCCAAATTCGATCCGTTTTCTCTCTCTTTCTCTTCGATCTCTTCTTTCTCCAACGATAACAACCTTCTCTTTCTCTCACCTACTCCTTCTATCTCTCTCCTCAATTTTCATTCTCATCTTGTGGATGCGGTGGTCAAGGAAGGGATTGAAGTTTCTCAGGAGTTTTTGGTAGGGAATTGGATTCCTCATTGCGCCGTTGCGAAGCGTGTTCCCAAGCAGAGAATGTCTGAAGCCTTTTCGCTTCTTAGAGACCTTAAATTGCCGGTTCAAGGATATGCTGTTGATGTTGCGCTCGTGCAATTCTCGCCGGTTCGTGAGATTTTCTCCTTTGTGCTTGTATCCCAAACACACTATATGCAATTGGCAACATTGATTGAATCTAATCATTTGTGTCGGTGA 606 0.4554 MSSSSEGYAIELYMDPALENQVLKAWNVLARRQISTELIEIGSRPHITLFSTPFLLEPSKLESLLKSLTSKFDPFSLSFSSISSFSNDNNLLFLSPTPSISLLNFHSHLVDAVVKEGIEVSQEFLVGNWIPHCAVAKRVPKQRMSEAFSLLRDLKLPVQGYAVDVALVQFSPVREIFSFVLVSQTHYMQLATLIESNHLCR* 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g1393 201 PANTHER - 5 184 - -
Psa1g1393 201 Pfam 2'-5' RNA ligase superfamily 44 169 - -
Psa1g1393 201 Gene3D Cyclic phosphodiesterase 8 181 - -
Psa1g1393 201 SUPERFAMILY LigT-like 4 150 IPR009097 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g1393 5 181 Calmodulin-binding Proteins AT5G40190 64.407 1.09e-76 226