Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g1385 ATGTATGGGTTCGGTGGTGAGAAGTGGAAACACAATCGGCACATGTGGCCTGTACCTTCTAACGCGACCACTGTAGTCACCGTTTCTTCACCGTCTCAATTTATATGCAAAGATGGACGCAAGATTCGTGTTGGTGACTGTGCACTTTTCAAACCACCCCAGGACTCCCCTCCTTTTATTGGAATAATTCGCAAGTTAACATTCGATAAAGAAGAAAGTCCAACTTTAGAAGTGAATTGGTTTTACCGACCTGCTGATTTGAATCTCTCTAAAGGGATTGTGCTGGAAGCTGCACCAAACGAAGTGTTCTACTCCTTTCACAAGGATGAGATACATGCTGCATCATTACTCCATCCTTGTAAAGTCGCATTTCTCCGTAAAGGTGTTGAACTTCCTTCAGGGATATCCGCATTTGTTTGTAGACGAGTGTATGACATTGAGAACAATTGTTTACGGTGGCTAACCGATAAGGACTACATTAATGAGCAGCAGGAAGAAGTTTACCAGCTTTTAGATAAGACAAAACTAGAAATGCATGGGGCTGTGCAGTCAGGAGGCCGTTCTCCAAAACCCTTGAATGGTCCAACGTCAACACAGTCATTGAAATCTAGTTCTGATAACATTCAAAATAGTTCTTCCTTTGGTGTACAGGGTAAGGGAAAAAAGAGAGAAAGAGGTGATCAGGGATCTGATTCATCTAAAAAAGAGCGATTATTTAAGGTAGAAGATGGAGATTCTGGTCAATTTAGACCAGAGAGCATGCTAAGGTCTGAGATTGCTAAAATCACTGATAATAAAGGTGGGCTTGTAGACTCTGACGGGGTTAAAAGACTTGTGCAACTCATGCAACCTGATAGTGCTGATAAAAAAATAGATTTGTCTGGGCGAATAATGCTTGTTGACGTAATATCGCTCACAGAGCGGTATGATTGTCTATGCTGGTTCGTACAGATTCGGGGTTTGCCTGTGTTAGATGAATGGCTGCAGGAGGTCCATAAGGGCAAAATTGGTGATGCTAATGTCGATAAGTCTGAAGAGTTTTTGTTAGCTTTACTCCGTGCACTGGATAATCTTCCCGTGAACCTTCATGCACTACAAACCTGTAATGTTGGAAAATCTGTTAATAATTTACGTAGCCACAAAAATTCTGAAATTCAGAGGAAAGCCAGGACTTTGGTAGACACGTGGAAGAAGCGTGTTGAAGCTGAAATGAATATGACTGATACAAAAACTGGTTCAACCCGTGCTGTTTCTTGGCCTGCAAAGCCAACACCATCAGATGTTTCTCACTCTGGAAATAGAAAAACTGGAGGATCCTCTGAGAATGTTGCGAAGAGCTCTGCTATTCAACCTTCAACATCCAAAAATTCCCAATCTAAACTTAATTCCGGAGAAGTAGCATCGAAGTTCTCTTCATCCCCTGGCTCAACTAAATCGGCGACTGCCTCAGTATGCAGCAACTCAAAAGATCAAAATGTTAAACTTGTTGTTTGTGCAACATCAGATCTACCTCTGACACCTATCAAGGAGGAGAGGAGCAGCAGTTCTAGTCAATCTCAAAACAACAGCAGATCTTGTTCTACTGAACATGCAAAGGCTATTGGTTCTTGCCGGGAAGATGCAAAGAGCTCCACTGCAGTGTCAATGAGTGTTAATAAAGTACCTGGTGGGGCATCCCGATCTCGTAAGTCGAGTAATGGTGTTCATGGAGCTAGTGTTGCTGTAGTTCAGAAGGATCATAGTTCTGCCAAGAACTCATCGAGAAATTCACCTTCTGATAAAGTTTCCCCAAGTCGAATGTCCCATGAAAAACCATCCGATCAGCCCCTTACTGATCAAGGGCATAATCAGCGACTGATTCTCAGGTTGCCTAACACCGGCCGCAGTCCTTCAAGGGGAGCTAGCGGGGGAAATTTTGAAGAACCTTCTTTTACATGCGGCAAAACATCACCTCCTGCTGACAAGAAGGAGAATCAGGACAAGAGATTTAAAGCTAAAATTGATTGTTTGCAAACCCATGTGTCGAATGTGATAAATGATTCATCCAATGCTAATGACACTACTGGTTGTGATGAAGCTAAGGGCTCTCCAACGGTGGGTGAGCGGTGCAGGGTTAATGATGATGGTGATAAAACAGCAGAAGTACCAAAAACAACCTGTTCTTCAACTGGATTTGTTTCCAGATCAGGGCAGACTTATGATGCTTCTTTAAGCCCCATGAATGCATTAGTTGAGAGCTGTGTGAAATTTTCTGAAGCAAGTGCCTCTGTGTCCCCTGGAAACGATGGGATAAATCTGCTTGCTTCTGTGGCTGCAGGAGAAATATCCAGATCTGGAAACATATCGCCTCTGCCTTCACCTGAGAGGAAGTCTCCTGCAGCTGATGAATCTAGCTCGGGGAATGATTCCAAGTTAAGACATTCACTTGAAGGAGCTGCTCGCACTCTTGGACAGTCTGATGGTGGGGTTACTGGAGAGCATACTCGGAATACTGTGGAGCCATTGCAAATCAAGAAGGATTCTAGGCATCCTGTGATGACAATATCACATGATTTTTCAGATGGCGAAGCCGTTCCATCTAGCCGTCTGGAGAAAACTGGTGACAGCAAAATTCAAACAAATTTCTCTACTACAGATCCCATACAAAATGCTGAAGGTCCATGCTTACGGCCGGACACCAAATGTGATACTTCTGAAACTGTGTTTCCAGGTAGAAAGGAGACTCATGCAGAAGTTGGAGGAGCAGAGCGTTTTCAGGAGCAGAGGGAATCAGGAACTCAATGGGCTAAAAACTGCAGTACTTCTAGCTCTAAATTGAAGTCGGGGACTTCCTCATTTGATGATGATCAGAAGATTGCTAACATGGTTGGTGGTATCGCAGAGCACGAGAAAATGTTGGTTTTAGAAACTGTTGCAAGTGGTATGATTGAAAATGAACAAGGTAAAAAATCCCCCGAGTTATCTTCAGGCGCAGATAGTAAGTCCCAGATCAGTGCAGATAAAGTGACAGGTATTGTTATGCCTGTGCAAAAAGGCTCACCAGTTACAGATAACTGTGAGTCCATTGATTTAAAAAGGGAGTCACCTTCTTCTTGTAATGCTTCGACAGTAGCCAGGGATGAAAATGATAGTCATGTGATGCCTGTTGATATTGAGCCTGATGAAAAACGAATGGATCTGGATTCAGCAGTTGCAGATGTTGTTAATGAACGTTCTGAAGAGGATTTTGGTAGAAAAGAGGTTATTGGCTCTGGTTCATTAGCTCATCCAGATTTACCAATTCCTGTAAAAGAGAACGATGATCCAAAAACATGTGATACTAATCTTGAAAGAAAGAAATCTGTAGTTGCTGCGGAGTTGAATGCGGGCAATGCTAATCCATCCCCAGTTGCTTGTGGATCTGATGTAGCTGTAAAATTGGACTTCGATTTAAATGAGGGATACCCTGTCGAGGATGTAGGCCAGGGGGATATTGTTAGACCCGAAGAACCTATCAGTTCATCTGCAGTTCATGCTCCTTGCCCATTGCCTTTTCCGATTCCGTCCCTCTCTGGGGCCTTCCATGCTTCAATTACAGTGGCTTCTGCTGCCAAAGGACCGGTTCTTCTGCCAGAAAATCCATTGCGAAGTAAGGTGGAACTTGGATGGAAAGGGTCAGCTGCTACAAGTGCATTCCGGCCAGCTGAACCTAGGAAAAATGCTGAGATGCCATCAAATACTGTTGATATTCCATCGGTTGACGCCACTTCAGTCAAACCAGACCGCGCTCCCTTAGATTTTGATTTAAATGTGGCAGATGAAATCAGTTTTGAGGACGTTGCTTATCGGGGTTCCTTAGAGTCCGGTGCTCATGACCGCAGCTCTGTGGGATTTGATCTTGATCTAAACAGGTTGGACGAGACTCCTGAAGCTGGAACTTTCTCTATAGGTAAAATGGATATTCCTTTACCAAGTAAACAACCTTCATTGTCCAGTGGGTTATCTAATGGTGGAAGTGTCTCAAGAGACTTCGATTTAAATAATGGACCAGGCCTTGATGAAGTTAGCACCGAAGTCCCCACTCGTACTCTGCAGATGAAAAGTACTATCCCATTTTCAAGTTCTGTTCATAGCACCAGAACAAATAATACAGAATTTGGGAATTATTCTTCATGGTTTCCTCCCGGCAATTCGTATTCTGCAATTACTGTCCCACCTCTTCTCACTGGTAGGGGGGAGCAAAGTTATGTTGGCGGTTCTGGGGCACAGCGGATCATAGGTTCCACAGGTAGCACGCCTTTTAGTCCTGAAATGTACCGAGGGCCAGTGCTCTCATCCTCCCCAGCTGTTGCATATCCACCTTCTACGCCCTTTCCATATCCAGGATTTCCATTTGAAACCAATTTTCCATTATCTTCAAATGCCTTTTCTGGTTGTTCAACACCATTTATGGATTCTACAACTGTGGGAGGACTTTGCTTTCCTACCATGCCCTCACAGCCCATTGGGCCTGGTGGCGTTGTCTCATCAACATATCCGCGTCCCTATGTTATGAGTCTTCCAGGTGGTACAAGTAATGTAATACCCGACAGCAGAAAATGGGGTAGTCAGAGTCTGGATCTTAATTCAGGCCCTGGTGTTACAGATACCGAGCGCAGAGATGACAGGTTGCCTTCAGGATTGAGACAGATGCCTGTCCCCAGTCAACAACAAGCCTTGATGGAGGATCACTTGAAGATGTTTCAGATGGCTGGGGCATTAAAAAGAAAGGAACCTGATGGTGGTTGGGATGGAACTGATAGATTCAGTTACAAACATCCCTCATGGCAATAG 4812 0.4401 MYGFGGEKWKHNRHMWPVPSNATTVVTVSSPSQFICKDGRKIRVGDCALFKPPQDSPPFIGIIRKLTFDKEESPTLEVNWFYRPADLNLSKGIVLEAAPNEVFYSFHKDEIHAASLLHPCKVAFLRKGVELPSGISAFVCRRVYDIENNCLRWLTDKDYINEQQEEVYQLLDKTKLEMHGAVQSGGRSPKPLNGPTSTQSLKSSSDNIQNSSSFGVQGKGKKRERGDQGSDSSKKERLFKVEDGDSGQFRPESMLRSEIAKITDNKGGLVDSDGVKRLVQLMQPDSADKKIDLSGRIMLVDVISLTERYDCLCWFVQIRGLPVLDEWLQEVHKGKIGDANVDKSEEFLLALLRALDNLPVNLHALQTCNVGKSVNNLRSHKNSEIQRKARTLVDTWKKRVEAEMNMTDTKTGSTRAVSWPAKPTPSDVSHSGNRKTGGSSENVAKSSAIQPSTSKNSQSKLNSGEVASKFSSSPGSTKSATASVCSNSKDQNVKLVVCATSDLPLTPIKEERSSSSSQSQNNSRSCSTEHAKAIGSCREDAKSSTAVSMSVNKVPGGASRSRKSSNGVHGASVAVVQKDHSSAKNSSRNSPSDKVSPSRMSHEKPSDQPLTDQGHNQRLILRLPNTGRSPSRGASGGNFEEPSFTCGKTSPPADKKENQDKRFKAKIDCLQTHVSNVINDSSNANDTTGCDEAKGSPTVGERCRVNDDGDKTAEVPKTTCSSTGFVSRSGQTYDASLSPMNALVESCVKFSEASASVSPGNDGINLLASVAAGEISRSGNISPLPSPERKSPAADESSSGNDSKLRHSLEGAARTLGQSDGGVTGEHTRNTVEPLQIKKDSRHPVMTISHDFSDGEAVPSSRLEKTGDSKIQTNFSTTDPIQNAEGPCLRPDTKCDTSETVFPGRKETHAEVGGAERFQEQRESGTQWAKNCSTSSSKLKSGTSSFDDDQKIANMVGGIAEHEKMLVLETVASGMIENEQGKKSPELSSGADSKSQISADKVTGIVMPVQKGSPVTDNCESIDLKRESPSSCNASTVARDENDSHVMPVDIEPDEKRMDLDSAVADVVNERSEEDFGRKEVIGSGSLAHPDLPIPVKENDDPKTCDTNLERKKSVVAAELNAGNANPSPVACGSDVAVKLDFDLNEGYPVEDVGQGDIVRPEEPISSSAVHAPCPLPFPIPSLSGAFHASITVASAAKGPVLLPENPLRSKVELGWKGSAATSAFRPAEPRKNAEMPSNTVDIPSVDATSVKPDRAPLDFDLNVADEISFEDVAYRGSLESGAHDRSSVGFDLDLNRLDETPEAGTFSIGKMDIPLPSKQPSLSSGLSNGGSVSRDFDLNNGPGLDEVSTEVPTRTLQMKSTIPFSSSVHSTRTNNTEFGNYSSWFPPGNSYSAITVPPLLTGRGEQSYVGGSGAQRIIGSTGSTPFSPEMYRGPVLSSSPAVAYPPSTPFPYPGFPFETNFPLSSNAFSGCSTPFMDSTTVGGLCFPTMPSQPIGPGGVVSSTYPRPYVMSLPGGTSNVIPDSRKWGSQSLDLNSGPGVTDTERRDDRLPSGLRQMPVPSQQQALMEDHLKMFQMAGALKRKEPDGGWDGTDRFSYKHPSWQ* 1604
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g1385 1603 MobiDBLite consensus disorder prediction 578 596 - -
Psa1g1385 1603 MobiDBLite consensus disorder prediction 189 217 - -
Psa1g1385 1603 PANTHER BAH AND TFIIS DOMAIN-CONTAINING PROTEIN-RELATED 1 1603 - -
Psa1g1385 1603 MobiDBLite consensus disorder prediction 406 477 - -
Psa1g1385 1603 SUPERFAMILY Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 310 413 IPR035441 -
Psa1g1385 1603 Pfam TFIIS helical bundle-like domain 351 400 IPR017923 -
Psa1g1385 1603 ProSiteProfiles TFIIS N-terminal domain profile. 322 403 IPR017923 -
Psa1g1385 1603 MobiDBLite consensus disorder prediction 1582 1603 - -
Psa1g1385 1603 Pfam BAH domain 41 148 IPR001025 GO:0003682
Psa1g1385 1603 MobiDBLite consensus disorder prediction 982 997 - -
Psa1g1385 1603 MobiDBLite consensus disorder prediction 1525 1553 - -
Psa1g1385 1603 Gene3D - 24 252 IPR043151 -
Psa1g1385 1603 ProSiteProfiles BAH domain profile. 40 155 IPR001025 GO:0003682
Psa1g1385 1603 MobiDBLite consensus disorder prediction 541 571 - -
Psa1g1385 1603 MobiDBLite consensus disorder prediction 508 530 - -
Psa1g1385 1603 PANTHER BAH DOMAIN-CONTAINING PROTEIN 1 1603 - -
Psa1g1385 1603 MobiDBLite consensus disorder prediction 610 645 - -
Psa1g1385 1603 MobiDBLite consensus disorder prediction 978 997 - -
Psa1g1385 1603 MobiDBLite consensus disorder prediction 906 926 - -
Psa1g1385 1603 MobiDBLite consensus disorder prediction 403 477 - -
Psa1g1385 1603 SMART BAH_4 40 155 IPR001025 GO:0003682
Psa1g1385 1603 MobiDBLite consensus disorder prediction 218 249 - -
Psa1g1385 1603 MobiDBLite consensus disorder prediction 179 252 - -
Psa1g1385 1603 MobiDBLite consensus disorder prediction 778 806 - -
Psa1g1385 1603 SMART TFS2_5 328 402 IPR003617 GO:0005634
Psa1g1385 1603 CDD TFIIS_I 332 401 - -
Psa1g1385 1603 Gene3D Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 273 404 IPR035441 -
Psa1g1385 1603 MobiDBLite consensus disorder prediction 508 660 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g1385 Psa-Chr1 93497363 93505560 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR IWS1 Psa1g1385 BAH 1.5e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g1385 - - gmx:112998769 2286.92