Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g1377 ATGTTTTGGAATTGTATGGTCCTGCTATGCAGATGTGGATCTCAGATTCTGGGGTATATAGGTATTAATTATAGTTCTCCAACACTTTCTTCAGCAATTGCTAATCTCGTACCTGCTTTTACTTTCATGCTAGCTGTTACTTTCAGGATGGAAAAGTTAGCTTTAAAGAGTAGAAGTAGTAATGCTAAAGTAGTGGGAAGCATAATATCAATAGCAGGTGCTTTTGTCATGACTTTTTACAAAGGAAAATCCATCTTGAATTCCTCACCACTTCATCAACCAATTGGCTTTCTCAACTCAGTGGATTCAAGTTGGGCCATTGCTGGCATTATTCTAACAGTTGACTACTTTCTGCTTTCACTATGGTATATTTTACAGGTGCATATCTTGAAAGGGTTCCCAGATGAACTAACCTTAGTCTTGTTATATTCCACAACTGCAACAATCATATCAATAGTTGTAGCTTTGTTATCAGTTCCAAATGCAAGTGCTTGGAAAATAGGACTAAATCTCTCACTCATCTCCATTGTTTCTTCTGGAATATTTGGAAAGTTAATAGGCAATCTAATTTATGCCTGGTCAGTTCACTTAAAGGGGGCTGTCTATGTTACATCATTCATGCCACTCCAAATCGCTATTTCTGGTATCTTGGGAGTTATATTCCTTGGTGATACGCTTCATATCGGAAGTATAATTGGAGCCATAATCATCTCAATTGGCTTTTATGGTGTATTATGGGGCAAAGCAACAGAAGAGATAGAGGAAGATGTTGGTAGTCTGGATTCATTATCTACAGAGAATGCACCTCTGTTGCAAAGTTATACAACTCAATCTTTTGAAAAGAAAATAGATGGAAATGTTTAA 864 0.3681 MFWNCMVLLCRCGSQILGYIGINYSSPTLSSAIANLVPAFTFMLAVTFRMEKLALKSRSSNAKVVGSIISIAGAFVMTFYKGKSILNSSPLHQPIGFLNSVDSSWAIAGIILTVDYFLLSLWYILQVHILKGFPDELTLVLLYSTTATIISIVVALLSVPNASAWKIGLNLSLISIVSSGIFGKLIGNLIYAWSVHLKGAVYVTSFMPLQIAISGILGVIFLGDTLHIGSIIGAIIISIGFYGVLWGKATEEIEEDVGSLDSLSTENAPLLQSYTTQSFEKKIDGNV* 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g1377 287 SUPERFAMILY Multidrug resistance efflux transporter EmrE 152 248 - -
Psa1g1377 287 PANTHER WAT1-RELATED PROTEIN 10 274 - -
Psa1g1377 287 PANTHER WAT1-RELATED PROTEIN 10 274 IPR030184 GO:0016021|GO:0022857
Psa1g1377 287 Pfam EamA-like transporter family 117 245 IPR000620 GO:0016020|GO:0016021
Psa1g1377 287 SUPERFAMILY Multidrug resistance efflux transporter EmrE 5 81 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g1377 Psa-Chr1 92889018 92893421 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g1377 14 274 Nodulin-like Gene Family AT5G40240 47.037 5.99e-81 247
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g1377 - - mtr:MTR_6g007753 436.032
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa1g1377 1 92889018 92893421 Psa1g1377 1 92889018 92893421 ECH