Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g1353 ATGGTTATACTTTGGCCCTCATTTTGCATATTGGAAAAGTACCAGTATGTAGCAAGTATAGGTGACCTTTGGACTTTGGCAGTGGTTATTTTGGTGAATTTGCACTTGGCTATGGATGTTGTTAGATGGTATTGGGTGACTCATGCAGTCATTTGGGGATCTATTGCTGCTACTTTCATTGCTGTCATGATCATTGATGCTATACCTAAACTTCCTGGTTTCTGCCTGAACACGACGACATTGCATTACTTCATTCCATACGCCGTTGGAGCTTCTGCAAGTACTCGTGTTTCGAACGAATTAGGAGCAGGGAATCCAAAGACAGCTAAGGGAGCTGTTCGAGTTGTTGTTATTATTGGAATTGCAGAAGCAATTATTGTCAGCACCTTCTTCCTATGTTTTCGAAATATTTTAGGATATGCTTATAGCAATGATGAACAAGTTGTGAATTATATAGCGAAAATGGTTCCACTTCTCTGTGTTTCTGTTAGCGCCGATAGTTTAATCGGCGCACTTTCAGGGATTGCAAGAGGAGGTGGATTTCAGGAAATGGGAGCTTATGTGAACCTTGGAGCATACTATATAGTTGGAATTCCTTTGGGTTTGTTATTAGCCATATTGCTAAACAATTGCGGTTCTCCTTTTTATCAATATTGCAAAACAAAAGCCATTCGATGCTCTTCCAAGATGGAGCTCTTGTCAGACAAGAACCCTTCGTATTCCGGTGATCAAGGTGCACTCATTCTTCCATCTGTATTGGATATAACAGATGGATCCATGAAGCTAATTAATGCGCATCCTGCTATGGTGCATCATCATCATCATTCTCAGAATCTTGGTCGTTCAATATTTTTGAAGCGATCTCGGTATTACTATGGTCACCAATATTCTCGACGTAACTCAGCCAATCATGCCAATGCATCTTCGTCTCGTAGCAAGG 940 0.4085 MVILWPSFCILEKYQYVASIGDLWTLAVVILVNLHLAMDVVRWYWVTHAVIWGSIAATFIAVMIIDAIPKLPGFCLNTTTLHYFIPYAVGASASTRVSNELGAGNPKTAKGAVRVVVIIGIAEAIIVSTFFLCFRNILGYAYSNDEQVVNYIAKMVPLLCVSVSADSLIGALSGIARGGGFQEMGAYVNLGAYYIVGIPLGLLLAILLNNCGSPFYQYCKTKAIRCSSKMELLSDKNPSYSGDQGALILPSVLDITDGSMKLINAHPAMVHHHHHSQNLGRSIFLKRSRYYYGHQYSRRNSANHANASSSRSK 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g1353 313 PANTHER MULTIDRUG RESISTANCE PROTEIN 75 214 - -
Psa1g1353 313 Pfam MatE 73 202 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Psa1g1353 313 PANTHER PROTEIN DETOXIFICATION 7-RELATED 75 214 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g1353 Psa-Chr1 91184750 91186358 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g1353 17 74 Primary Pumps ATPases AT5G04930 65.517 5.85e-21 91.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g1353 K03327 - gmx:100782284 201.445