Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g1318 ATGCCTGAAGGGGGAAGAAAGAGGATACATTTTAGCAAACTATATTCATTTTCTTGTTTCAAGTCACCATTTAAAGAGGGTCATTATCAAATTGGACAAAAAGGGTATTCAAGAGTTGTTTATTGCAATGATCCTGATAACATTGAAGCAATTCAGTTGAATTATGATGGAAACTATGTTTCAACTACCAAGTATACAGCTTTTAATTTTATACCAAAGTCATTGTTTGAACAGTTCAGAAGAGTTGCAAATATCTACTTTCTTGTTGTTGCTTGTGTTTCGTTTAGTCCTTTGGCACCTTATACAGCTTTGAGTATTGCTGCGCCTTTGGTGGCTGTTATTGGTGCTACTATGGCCAAAGAAGCTGTGGAAGATTGGAGAAGGAGAAGACAGGATATAGAGGCGAACAACAGAAAGGTTCAGGTATATGGTAAAAACAATACATTTGTGGAGACAAGATGGAAGAAGCTTCGTGTCGGTGATGTGATTAAAGTGTACAAAGATGAATACTTTCCTTCTGATCTTCTTCTACTTTCATCAAGCTACGGGGACGGTGTTTGCTATGTCGAGACAATGAATCTTGACGGAGAAACTAATCTAAAATTAAAGCATGCATTAGAGGCTACAACTCGTCTTAATGATGAAGAATCTCTGCAGAAGTTTAGAGCTATGGTCAAATGTGAGGATCCTAATGAAAATCTATACTCATTTATTGGAACTTTGAAATACGAGGGTGTAGAATATCCTCTTTCATTGCAGGAAATCCTTTTACGAGATTCTAAGCTGAGAAATACCGAATATATCTACGGCGTTGTTATCTTTACTGGCCATGATACAAAAGTGATGCAAAACTCCATTGATCCTCCGTCAAAGAGGAGCAAAATTGAGAGAAAAATGGATAAGATAATTTACATTCTCTTCAGTACTTTGATTTTGATATCCTTTATCGGTTCTTTGTTTTTCGGTGTCGAGACCAAAAGGGATATTACTAGTGATGGAAATTACAGAAGATGGTATCTTCATCCAGACGAGTCAACAGTATATTTCGATTCTAGAAGAGCAGGCCTCGCCTCGATTCTTCATTTTTTGACTGCGCTTATGCTGTATGGGTATCTAATTCCGATATCACTTTATGTGTCGATAGAACTTGTAAAAGTTCTGCAGTGTATTTTCATCAACCAAGATCAGGAAATGTATTTTGAAGAATCGGATCGGCCAGCTCATGCACGGACGTCTAATTTGAATGAAGAACTCGGTCAAGTTGATACTATATTGTCTGATAAAACAGGTACTTTGACATGTAACTCTATGGAGTTTGTCAAATGTTCCGTTGGGGGTATTCAGTATGGTCGCGGTATTACCGAAGTAGAGAAGGCACTTGCTAGGAGAGCGAAGGGTGGAGAATCTGAAGGTGATGCGTATTCATTGGATATCTTGAGTAAGAGTAGCGAGGCTGTGGAACCTCAGAAACCAATTAAAGGCTTTAACTTTAAAGATGAACGTATAATGAACGGATTATGGATTAACGAACAACATCCGGACATCATAGAGAAATTCTTTCGAGTTTTAGCTATATGTCATACAGCAATTCCTGATGTAGATAAAAAGTCGGGTGAAATTTTGTATGAAGCTGAATCGCCAGATGAAGCGGCATTTGTCATAGCTGCAAAAGAGCTTGGTTTTGAGTTTTTTGCTCGGACACAAACAAGCATTTCGTTGCACGAACTCAATCATGAAAGAGGAAAAAGGGTTGACAGAGTGTACCGGCTTCTGCATATCTTAGAGTTCAGCAGTTCTCGCAAAAGAATGTCGGTGATAGTGAGGAACGAGGAAAATAAAATATTGCTCCTATGCAAGGGTGCAGACAGTGTTATGTTTGAAAGGCTCTCGGAATATGGAAGAGAATTTGAGGCTGAAACCAATAATCATATAAAAAAATATTCCGAGGCAGGTTTAAGAACTCTCGTGATCACATACCGTGAACTTGGCGAAGAAGAATATAACCAATGGGACAAGGAGTTCTCGAAGGCCAAAACATCTTTAGCAGCAGACCGTGATACACTGGTCGATGCAGCTGCTGATAAGATGGAAAGAGATTTGATACTTCTTGGAGCTACCGCAGTCGAGGATAGACTGCAAAAAGGGGTTCCTGAATGTATTGAAAATCTTGCTAAGGCAGGAATCAAGCTATGGGTATTGACCGGGGACAAAATGGAAACTGCGGTCAACATCGGGTATGCTTGTAGTTTACTTAGACAAGACATGACACAGATAGTGATCACTCTTGATTCATCGGAAATCCTATCATTGGAGAAACAAGGGAACAAGGAGGCTCTAATAAAGGCCTCTCATGATAGCATTGAGAAGCAAATTAATGATGGAATCTTGCAAATCAAGTCAGCGAAAGAGGGTTCCTCATCGGAAAGTTCTTCGTTTGGCTTGATAATTGATGGGAGGTCCTTGGAGTATTCTCTCAACAATGCTTTGGAGAAACCGTTCTTTAAGTTGGCTAGTAATTGCGCTTCTGTCATTTGTTGTCGGTCTTCGCCAAAACAAAAAGCTCGTGTTACGAAATTGGTGAAATTGGAAACAGGAAAGACAACGTTATCTATCGGCGATGGTGCAAATGATGTTGGCATGCTTCAGGAGGCTGATATTGGAGTTGGCATTAGTGGTGCAGAAGGGATGCAGGCTGTGATGGCGAGTGATTATGCAATTGGTCAATTCCGTTTTCTAGAGCGTTTGTTGTTGGTACATGGCCACTGGTGCTATAGGAGAATATCAATGATGGTAAAACCATGCATTCAAAGAACTGTGTTTGTGAATGCATCATGTATGTTATAA 2844 0.3963 MPEGGRKRIHFSKLYSFSCFKSPFKEGHYQIGQKGYSRVVYCNDPDNIEAIQLNYDGNYVSTTKYTAFNFIPKSLFEQFRRVANIYFLVVACVSFSPLAPYTALSIAAPLVAVIGATMAKEAVEDWRRRRQDIEANNRKVQVYGKNNTFVETRWKKLRVGDVIKVYKDEYFPSDLLLLSSSYGDGVCYVETMNLDGETNLKLKHALEATTRLNDEESLQKFRAMVKCEDPNENLYSFIGTLKYEGVEYPLSLQEILLRDSKLRNTEYIYGVVIFTGHDTKVMQNSIDPPSKRSKIERKMDKIIYILFSTLILISFIGSLFFGVETKRDITSDGNYRRWYLHPDESTVYFDSRRAGLASILHFLTALMLYGYLIPISLYVSIELVKVLQCIFINQDQEMYFEESDRPAHARTSNLNEELGQVDTILSDKTGTLTCNSMEFVKCSVGGIQYGRGITEVEKALARRAKGGESEGDAYSLDILSKSSEAVEPQKPIKGFNFKDERIMNGLWINEQHPDIIEKFFRVLAICHTAIPDVDKKSGEILYEAESPDEAAFVIAAKELGFEFFARTQTSISLHELNHERGKRVDRVYRLLHILEFSSSRKRMSVIVRNEENKILLLCKGADSVMFERLSEYGREFEAETNNHIKKYSEAGLRTLVITYRELGEEEYNQWDKEFSKAKTSLAADRDTLVDAAADKMERDLILLGATAVEDRLQKGVPECIENLAKAGIKLWVLTGDKMETAVNIGYACSLLRQDMTQIVITLDSSEILSLEKQGNKEALIKASHDSIEKQINDGILQIKSAKEGSSSESSSFGLIIDGRSLEYSLNNALEKPFFKLASNCASVICCRSSPKQKARVTKLVKLETGKTTLSIGDGANDVGMLQEADIGVGISGAEGMQAVMASDYAIGQFRFLERLLLVHGHWCYRRISMMVKPCIQRTVFVNASCML* 948
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g1318 947 Pfam Phospholipid-translocating P-type ATPase C-terminal 899 941 IPR032630 -
Psa1g1318 947 Gene3D - 542 702 IPR023299 GO:0000166
Psa1g1318 947 PRINTS P-type cation-transporting ATPase superfamily signature 425 439 - -
Psa1g1318 947 PRINTS P-type cation-transporting ATPase superfamily signature 871 890 - -
Psa1g1318 947 SUPERFAMILY Calcium ATPase, transduction domain A 142 283 IPR008250 -
Psa1g1318 947 SFLD p-type atpase 407 922 IPR044492 -
Psa1g1318 947 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 5 931 - -
Psa1g1318 947 Pfam Phospholipid-translocating ATPase N-terminal 40 102 IPR032631 -
Psa1g1318 947 SUPERFAMILY Calcium ATPase, transmembrane domain M 46 933 IPR023298 -
Psa1g1318 947 Gene3D - 110 286 - -
Psa1g1318 947 Gene3D - 703 911 IPR023214 -
Psa1g1318 947 CDD P-type_ATPase_APLT_Dnf-like 57 931 - -
Psa1g1318 947 SFLD C1.7: P-type atpase like 407 922 - -
Psa1g1318 947 SUPERFAMILY HAD-like 420 926 IPR036412 -
Psa1g1318 947 TIGRFAM ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase 55 939 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016021|GO:0140326
Psa1g1318 947 Coils Coil 116 136 - -
Psa1g1318 947 ProSitePatterns E1-E2 ATPases phosphorylation site. 427 433 IPR018303 -
Psa1g1318 947 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 502 668 IPR023299 GO:0000166
Psa1g1318 947 Pfam Cation transport ATPase (P-type) 543 630 - -
Psa1g1318 947 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 843 943 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Psa1g1318 947 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 9-RELATED 5 931 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g1318 Psa-Chr1 89130968 89137612 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g1318 1 931 Primary Pumps ATPases AT1G68710 64.461 0.0 1266
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g1318 K01530 - gmx:100817020 1521.91