Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g1313 ATGAATTCTAGGAGATTTATTCACTTACTTTGGTGTTTCAATCTGTATGTAGCATTTACATTCATTCAAGTTTCATCTGAGAACAATGTTCATGATTCAAAGAAATGTGACTACCCTGCAATTTACAATTTTGGTGACTCAAATTCTGATACCGGAGCCGGATATGCAGTATTCGCAGGTGTAAATCCTCCCAATGGCATAAGCTTTTTCGGAAGCCTATCGGGAAGGGCTTCTGATGGTCGTCTCATCATCGATTTTATCAGTGAAGAATTAAAGATACCATATCTAAGTGCTTATTTGAACTCAGTTGGATCAAATTACAGACATGGTGCAAACTTTGCAGTTGGAGGCGCGTCCATTCGCCCGGGCGGTTACAGTCCAATCAACCTTGGTGTTCAAGTATCTCAGTTTGTTTTGTTCAAATCACACTCCAAGATTCTCTTCAATCAACTCTCTAACAACAGGACAGAACCGCCTTTTAGAAGCGGTCTTCCGAGGAATGAGGACTTCTCTAAGGCCCTTTACACCTTTGATATCGGACAAAATGATATTGCCATCGGTTTGCAGCACACTTCCGAGGAACAGGTTAAAAGCTCAATTCCTGATATCTTGAGTCAGTTCGCCCAAGCAGTGCAGGATCTATACAATGAAGGTGCAAGAGTGTTTTGGATTCACAATACAGGTCCGATCGGATGCTTACCCTATGATATGATCTATTATCAACACAAGAACGGTAACTTGGATGCAAATGGATGTGTTAAACCGCACAATGAGATTGCTCAGGAATATAACAGGAAGCTAAAAGACCGAGTGTTTCAGCTAAGAAGAAAGTTTCCATTAGCCAAATTTACGTATGTTGATGTTTACGCAGCCAAATACAAACTTATCAGCAATGCAAAGAGCCTAGGTTTTGTGAATCCATTGGAATTTTGCTGTGGAAGTTACTACGGTTACCATATAAATTGTGGGAAGAAGGCGATAATAAATGGAACAGTATATGGAAATCCATGTAACAATCCTTCGCAACATGTTAGTTGGGATGGTATACATTACTCCCAAGCAGCAAATCAATGGATTGCTAAACAAATTGTGTATGGATATTTATCTGATCCACCAGTTTCAGTTGTGAAGGCATGTCTTACATGA 1146 0.3997 MNSRRFIHLLWCFNLYVAFTFIQVSSENNVHDSKKCDYPAIYNFGDSNSDTGAGYAVFAGVNPPNGISFFGSLSGRASDGRLIIDFISEELKIPYLSAYLNSVGSNYRHGANFAVGGASIRPGGYSPINLGVQVSQFVLFKSHSKILFNQLSNNRTEPPFRSGLPRNEDFSKALYTFDIGQNDIAIGLQHTSEEQVKSSIPDILSQFAQAVQDLYNEGARVFWIHNTGPIGCLPYDMIYYQHKNGNLDANGCVKPHNEIAQEYNRKLKDRVFQLRRKFPLAKFTYVDVYAAKYKLISNAKSLGFVNPLEFCCGSYYGYHINCGKKAIINGTVYGNPCNNPSQHVSWDGIHYSQAANQWIAKQIVYGYLSDPPVSVVKACLT* 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g1313 381 Gene3D SGNH hydrolase 26 366 IPR036514 -
Psa1g1313 381 PANTHER 2, PUTATIVE-RELATED 16 379 - -
Psa1g1313 381 Pfam GDSL-like Lipase/Acylhydrolase 41 363 IPR001087 GO:0016788
Psa1g1313 381 PANTHER ZINC FINGER FYVE DOMAIN CONTAINING PROTEIN 16 379 - -
Psa1g1313 381 CDD SGNH_plant_lipase_like 39 367 IPR035669 -
Psa1g1313 381 SUPERFAMILY SGNH hydrolase 112 364 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g1313 Psa-Chr1 87942079 87944229 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g1313 32 364 Pollen Coat Proteome AT1G75910 30.548 7.87e-27 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g1313 - - ccaj:109788792 630.943
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa1g1313 1 87942079 87944229 Psa1g1313 1 87942079 87944229 ECH