Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g1281 ATGTCTTCTTATTTTCTCTCTTCAAACTCCAAAATGCATACTTTCTCTATGTTACCTTCTCATTCAACCCTACAAATTTCAAACCACATAACCATACCCAAGTTTCACCCTTTTCAATTCTCTCATTCTCACCATTTTTCTTCTTCACCACTTAGACTCACCATTGATGGATTTCCATGCCCATCTTCTTCTTTGTTTCAATCTCTTAGAAAGTCTTCACCTTTTCTCATTTCCACTCCAAAAATTCATTCTTTTAGAATCCTTGCTGCTTCTCTTCCAGAGGGACAGAGTCATGAACCAACTCAACCTTCTGGTTTTGTTCAATCTCTACAACTTGGTTTCATGTTTGCTACTTGGTATCTCTTGAATATTTACTTCAACATTTACAACAAACAGGTTCTAAAAGTCTATCCATTTCCAGCAACAGTTACAGCATTTCAATTTGGCTTTGCTTCATTGGTGATTAATTTGATCTGGATTTTGAATCTACATCCAAGGCCAAACATTAGAAGATCACAGTTTGCAGCAATTCTTCCACTGGTTATGGCTCATACATTGGGAAACCTGTTGACCAACATCAGTCTTGGCAAGGTTTCTGTTTCATTCACTCACACCATTAAAGCTATGGAGCCTTTCTTCACTGTTGTTCTTTCATCTTTTCTCCTCGGTGAGGTGCCTACTTTTTGGGTGGTTTCTTCTCTTCTGCCGATAGTCGGTGGAGTGGCATTGGCTTCAATGACTGAAGTTTCTTTCAATTGGATTGGATTCAGCACTGCAATGGCATCCAACCTTACGAATCAATCGCGGAACGTTATGAGCAAAAAACTAATGTCTAATGAAGAGGAAGCTTTGGACAATATCAATCTCTATTCAGTTATAACCATCATTTCCTTTTTCTTTTTGGTACCATGTGCTATATTTTTGGATGGTTTCAAGTTTACTCCTTCGTATCTGAAATCTGCGGCAAGCCAAGGATTGAATGTTAGAGAGTTATGCATAAGATCAGTTTTGGCTGCATTCTGCTTCCATGCATACCAGCAGGTTTCATATGGGATATTAGAGAAAGTGTCCCCTGTGACACACTCAGTAGGAAATTGTGTGAAGCGTGTGGTTGTCATAGTCTCTTCTGTTATCTTCTTCCAAATTCCTGTCTCATCTATTAATGCACTTGGAACTGCTATTGCACTTGTTGGTGTTTTCTTGTATTCAAGGGCAAAGAGGATCAAGCCAAAAACAAATACAGCATAA 1248 0.3862 MSSYFLSSNSKMHTFSMLPSHSTLQISNHITIPKFHPFQFSHSHHFSSSPLRLTIDGFPCPSSSLFQSLRKSSPFLISTPKIHSFRILAASLPEGQSHEPTQPSGFVQSLQLGFMFATWYLLNIYFNIYNKQVLKVYPFPATVTAFQFGFASLVINLIWILNLHPRPNIRRSQFAAILPLVMAHTLGNLLTNISLGKVSVSFTHTIKAMEPFFTVVLSSFLLGEVPTFWVVSSLLPIVGGVALASMTEVSFNWIGFSTAMASNLTNQSRNVMSKKLMSNEEEALDNINLYSVITIISFFFLVPCAIFLDGFKFTPSYLKSAASQGLNVRELCIRSVLAAFCFHAYQQVSYGILEKVSPVTHSVGNCVKRVVVIVSSVIFFQIPVSSINALGTAIALVGVFLYSRAKRIKPKTNTA* 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g1281 415 Pfam Triose-phosphate Transporter family 110 403 IPR004853 -
Psa1g1281 415 TIGRFAM tpt: Tpt phosphate/phosphoenolpyruvate translocator 110 412 IPR004696 GO:0016021|GO:0022857|GO:0055085
Psa1g1281 415 PANTHER PHOSPHOENOLPYRUVATE/PHOSPHATE TRANSLOCATOR 2, CHLOROPLASTIC 48 409 - -
Psa1g1281 415 PANTHER SOLUTE CARRIER FAMILY 35 48 409 - -
Psa1g1281 415 SUPERFAMILY Multidrug resistance efflux transporter EmrE 151 247 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g1281 Psa-Chr1 86263098 86266178 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g1281 81 413 Antiporters AT3G01550 63.964 1.55e-144 414
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g1281 K15283 - gmx:100819280 566.229
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa1g1281 1 86263098 86266178 Psa1g1281 1 86263098 86266178 ECH