Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g1278 ATGAAAATGATTCAACAAAAGACAAAAACAAATCCACTATCCATTTTACGTGAAGCAATACGTCGGGTAACTCCCAATCTAGCAGTAAAAGCAAGACGCGTGAGCGGATCGACTCGTCAAGTTCCCATTGAAATAGAATCGACACAAGGAAAAGAACTTGCCATTCGTTGGTTATTAGCGGCATCTCGAAAACGTCCTGGTCGAAATATGGCTTTCAAATTAAGTTCCGAATTAATGGATGCTGCCAAAGGGAGTGGTGATGCCATACGCAAAAAGGAAGAGACTCATAGAATGGCGGAGGCAAATAGAACTTTTGCACATTTTCGTTAA 330 0.4121 MKMIQQKTKTNPLSILREAIRRVTPNLAVKARRVSGSTRQVPIEIESTQGKELAIRWLLAASRKRPGRNMAFKLSSELMDAAKGSGDAIRKKEETHRMAEANRTFAHFR* 110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g1278 109 MobiDBLite consensus disorder prediction 85 109 - -
Psa1g1278 109 PANTHER 30S RIBOSOMAL PROTEIN S7, CHLOROPLASTIC 1 109 - -
Psa1g1278 109 SUPERFAMILY Ribosomal protein S7 1 103 IPR036823 -
Psa1g1278 109 Pfam Ribosomal protein S7p/S5e 1 103 IPR023798 -
Psa1g1278 109 TIGRFAM rpsG_bact: ribosomal protein uS7 1 109 IPR005717 GO:0003735|GO:0006412|GO:0015935
Psa1g1278 109 Gene3D Ribosomal protein S7 domain 1 109 IPR036823 -
Psa1g1278 109 PIRSF RPS7p_RPS7a_RPS5e_RPS7o 1 109 IPR000235 GO:0006412
Psa1g1278 109 PANTHER RIBOSOMAL PROTEIN S7 1 109 IPR000235 GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g1278 Psa-Chr1 86244715 86245791 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g1278 1 103 Cytoplasmic Ribosomal Protein Gene Family AT2G37270 32.407 6.49e-08 47.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g1278 K02992 - sind:11452462 188.348