Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g1277 ATGAATACGACGTCGTTTATGGACAAGCAGATAATGGATCTGAATCTCTCTCACGGATCTTCTACTCCTCTCACCAACGATTTCATCGACCTAATCAAGCTTCGTCATCCAGAACAACAAGTACTTGAAGACGATGATGAACAACAACACGAAGAAATTGATCCATCTACTCACAATAACGGAATCAAAAGTGATGATATCGTTCCTAGCTACGATTTTCAACCGATTCGTTCACTCCCTGATTCTTCCCCCAATTACGGTGCATCGCTTACGAAGAATTGGAACTCCGATTCTAACTCCAAAAAATACAGTTCTCTGGATTCTTTTGAACCTGCAAAGGTGACTGTAGAAAAAGACCGAAGTGCTGTTGATGCCGCAATTTTGTTAGAGATTGATCGAACAATGAAGAAACATATGGACAATTTGCATCATGTTCTGGAAGGTGTTAGTGCACGGTTAACACAACTAGAAACCAGAACTCACCATCTTGAGAGTTCTATGGATGATTTGAAGGTATCTGTTGGAAATAATCATGGAATCACTGATGGGAAATTGAGGCTGTTGGAGAATATTCTCTGTGAGGTGCAAACAGGAGTGCAAAATATCAAGGACAAACAAGATATTGTGCAAGCTCAGCTGCAACTGGCAAAACTGCAAGTGTCGAAGACAGAGCAACAATCAAAACCTCAAACTAGTGCAGTATCAGATCCTGTGCAGCAAGCTTCATCTGCTCCCCAGCAATCTCAGCAACATCTACCTTCATCTTTTAACCTTCCACAATCAACTCCTGTGATTTCTCCCCCTAATGCACCTCCTCAACCTCCTTCTCAACAGGGTTTACCACCTCCGGTTCAACTTCCCAATCAATACTCACAGATCCCAAATCCAATTGCTCCTCAGAGAGATCCATACATGCCACCACCTGTTCATTCTCAGGAAATCCCAAATCAGCAGTACCAGCTGCCTTTAACTCAGCAGCCACATCCTCAACCAGGGGCACCTCCACATCAACAATATCAGCAAACCCCTCATCCTCAGTACTCTCAGCCAGCACATCATCTACCTCAACAGCAGCCACCACTTTCATCCGGAAATCCACCTCAACTGCAATCTTCCATGGGTCACCACCATCTCGAAGAACCATCTTTTGTTCCTTCTCAGAGTTATCCTCCCAATCTCCGCCAACCACCATCTCAGCCACCCAGTGGACCTCCTCCACCTGCCCAGCAATTCTATGGGACACCGTCCCAAGGATATGAATCACCATCAAGTAGATCTGGTTCAAGTTATTCTTCTGGATATGGTACATTATCTGGGCCTGCTGAGCCATATCGATATGGTGGGCCACCTCAGTATGGTGGCAAACAACCACAAGTACATAACGTCTCTGTGTCTTCCAGTGGTGGAAGTGGTTACCCACAGCTTCCAACTGCCCGTGCTCTCCCACAAGCAATACCTACTGCATCATCGGTAAGTGGTGGCTCAGGCTCTGCTGGAACTGGTAACAGGGTTTCTGTTGACGATGTAGTTGAAAAAGTTGCTACAATGGGATTCCCTAGAGACCATGTGAGGGCAACGGTTCGGAAGCTGACAGAGAATGGTCAATCAGTTGACCTAAATACAGTGCTGGATAAGCTTATGAATGAAGGTGGCGGTGATATGCAGCAACAAAGAGGTTGGTTTGGTCGGTAA 1692 0.4551 MNTTSFMDKQIMDLNLSHGSSTPLTNDFIDLIKLRHPEQQVLEDDDEQQHEEIDPSTHNNGIKSDDIVPSYDFQPIRSLPDSSPNYGASLTKNWNSDSNSKKYSSLDSFEPAKVTVEKDRSAVDAAILLEIDRTMKKHMDNLHHVLEGVSARLTQLETRTHHLESSMDDLKVSVGNNHGITDGKLRLLENILCEVQTGVQNIKDKQDIVQAQLQLAKLQVSKTEQQSKPQTSAVSDPVQQASSAPQQSQQHLPSSFNLPQSTPVISPPNAPPQPPSQQGLPPPVQLPNQYSQIPNPIAPQRDPYMPPPVHSQEIPNQQYQLPLTQQPHPQPGAPPHQQYQQTPHPQYSQPAHHLPQQQPPLSSGNPPQLQSSMGHHHLEEPSFVPSQSYPPNLRQPPSQPPSGPPPPAQQFYGTPSQGYESPSSRSGSSYSSGYGTLSGPAEPYRYGGPPQYGGKQPQVHNVSVSSSGGSGYPQLPTARALPQAIPTASSVSGGSGSAGTGNRVSVDDVVEKVATMGFPRDHVRATVRKLTENGQSVDLNTVLDKLMNEGGGDMQQQRGWFGR* 564
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g1277 563 MobiDBLite consensus disorder prediction 339 372 - -
Psa1g1277 563 MobiDBLite consensus disorder prediction 412 433 - -
Psa1g1277 563 MobiDBLite consensus disorder prediction 390 411 - -
Psa1g1277 563 PANTHER RECEPTOR-LIKE KINASE, PUTATIVE (DUF1421)-RELATED 1 563 - -
Psa1g1277 563 MobiDBLite consensus disorder prediction 311 326 - -
Psa1g1277 563 MobiDBLite consensus disorder prediction 41 66 - -
Psa1g1277 563 PANTHER RECEPTOR-LIKE KINASE, PUTATIVE (DUF1421)-RELATED 1 563 - -
Psa1g1277 563 Pfam UBA-like domain (DUF1421) 506 549 IPR010820 -
Psa1g1277 563 MobiDBLite consensus disorder prediction 222 254 - -
Psa1g1277 563 MobiDBLite consensus disorder prediction 306 433 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g1277 Psa-Chr1 86178594 86183840 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g1277 131 549 Trihelix Transcription Factor Family AT3G01560 45.390 4.84e-71 231
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g1277 - - gmx:100777464 630.172