Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g1244 ATGTTAGTTTCTACAACAACACTTTGTGCACTCTTTTTCTTCCTATTCATCATCTTCAAATTCCACCATAGAAAAAAATGTTGCAAATATCCCATTTTTAGAGAATATCCTTTTCTAGGCATGTTACCAACAATCCTTTGGAACTTATGGAATATTCATGATTTCATAACTGAGGCACTGAAAAAGCACCATAGAGGCACTGCTGAGTTCATGGGACCTTGGTTTACCAACATGAACTATTTGGTCACTAGTGATCCCATCAACGTGCATCACATGATGAGCAAGTGTTTCGATAACTACGTGAAAGGTTCTGAGTTTCGTGATATTTTTGAAGCATTCGGAGATGGAATATTTGTCGCGGATTCGGAGACATGGAAATATAACAGATCTCTTTTTCACTCGGTTTTCAAGCAAAGAGGCTTTGAACTTTTTCAAGAGAAAATCATTAAAAACAAGCTGGAGAGAAGCTTGATTCCTGTGTTGGATCATGTTCAACAACAAGGGTCGGTGGTGGATTTACAAGATGTATTCAGTCGTTTCACATTCGACAACATTTGTTCGGTAGTTCTCGGATGTGATCCGAATTGTCTTTCCATTGAATTTCCTGAGATTGCTTGTGAGAAGGCTTTTGACCAAATTGAAGAATGCATATTCTATAGACATGCTATTCCAAAAAGTTTTTGGATGTTTCAGAAGCTTCTTCAAGTTGGTCAAGAGAAAAAAATGACAAAAGCATATAAAGAATTTGATCAATTTATATATGCTAATATAGAGTCCAAAAGAGAGGATTTAAAAAAAGGTATAAAAAATATTGAAATGGAAGACTTGTTAACAACTTTCATGAAAGTAGAGAAGGGGTCACAAGTAGTAGTTCATGATGACAAGTTTCTAAGAGATGTTGCTTTCAATCTCTTTGTAGCCGGAAGAGATACAATAACTTCAGCACTCACATGGCTGTTTTATCTTATTGCTACACATCCTTTAGTAGAAGCTAAAATTCTTCAAGAGATTAAAGAAAATTTTGGAGGTATTAATATTGAAAAAAAGTTAGGAGTTGATGAGGTGAAAAAGCTAGTTTATCTTCATGGTGCTATATGTGAGGCTGTGAGGCTTTTTCCTCCTATACCTTTTGAGAGAAAGCAAGCAATAAAAGATGATATACTTCCAAGTGGCCACGTTGTTAATCCTAATACAACTATATTATTTTCTTTGTATTCAATGGGGAGAGTTGAAGAGACATGGGGAAAAGATTGCTTGGAGTTCAAGCCAGAGAGATGGATATCTGAGAGAGGAGGGATTGTTCATGAACCATCTTATAAGTTCATTAGTTTCAATGCTGGACCTAGAACTTGTTTGGGAAAGGACTTGTCGTTCATTCAAATTAAGATGGTGGCAGTTGCTATTTTGTGCAGATATCATATCCAAGTAGTAAAAGGCCATATTCCTATCCCAAATCTTTCAATTGTACTTCTTATGAAGAATGGTTTGAAGGTTAGGATAACAAAAAGAGAAATTTGA 1518 0.3557 MLVSTTTLCALFFFLFIIFKFHHRKKCCKYPIFREYPFLGMLPTILWNLWNIHDFITEALKKHHRGTAEFMGPWFTNMNYLVTSDPINVHHMMSKCFDNYVKGSEFRDIFEAFGDGIFVADSETWKYNRSLFHSVFKQRGFELFQEKIIKNKLERSLIPVLDHVQQQGSVVDLQDVFSRFTFDNICSVVLGCDPNCLSIEFPEIACEKAFDQIEECIFYRHAIPKSFWMFQKLLQVGQEKKMTKAYKEFDQFIYANIESKREDLKKGIKNIEMEDLLTTFMKVEKGSQVVVHDDKFLRDVAFNLFVAGRDTITSALTWLFYLIATHPLVEAKILQEIKENFGGINIEKKLGVDEVKKLVYLHGAICEAVRLFPPIPFERKQAIKDDILPSGHVVNPNTTILFSLYSMGRVEETWGKDCLEFKPERWISERGGIVHEPSYKFISFNAGPRTCLGKDLSFIQIKMVAVAILCRYHIQVVKGHIPIPNLSIVLLMKNGLKVRITKREI* 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g1244 505 Coils Coil 254 274 - -
Psa1g1244 505 PANTHER CYTOCHROME P450 FAMILY PROTEIN 12 503 - -
Psa1g1244 505 PRINTS E-class P450 group I signature 296 313 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa1g1244 505 PRINTS E-class P450 group I signature 316 342 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa1g1244 505 PRINTS E-class P450 group I signature 441 451 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa1g1244 505 PRINTS E-class P450 group I signature 451 474 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa1g1244 505 Pfam Cytochrome P450 45 494 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa1g1244 505 SUPERFAMILY Cytochrome P450 23 503 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa1g1244 505 Gene3D Cytochrome P450 16 505 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa1g1244 505 PRINTS P450 superfamily signature 307 324 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa1g1244 505 PRINTS P450 superfamily signature 363 374 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa1g1244 505 PRINTS P450 superfamily signature 442 451 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa1g1244 505 PRINTS P450 superfamily signature 451 462 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa1g1244 505 PANTHER CYTOCHROME P450 12 503 - -
Psa1g1244 505 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 444 453 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g1244 Psa-Chr1 83779475 83781426 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g1244 3 503 Cytochrome P450 AT4G39490 46.602 4.90e-161 465
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g1244 - - aprc:113867564 702.59