Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g1240 ATGATCAATATCATGTTTAGCTATACATCAATGATTTTTGCACTTTTTTTCTTCTTATGCATAATCTTCCAAATTCATCGTCAACATCATTGCAAGTATCCAGTTTTGATAGATTATCCTTTTTTAGGCATGCTACCACCAGTCCTTTGGAACTTGTGGAGAGTTCATGATTTCGTAACTGAGGCATTGAAAAAACAACATAGAGGCACTGCTGAGTTCATGGGACCTTGGTTTACCAACATGAACTATTTGGTCACTAGTGATCCCATCAACGTGCATCACATGATGAGCAAGTGTTTCGAAAACTACGTGAAAGGCGATGAGTTTCACGAGATTTTTGAAGCATTCGGAGATGGAATATTTGCTAGTGATTCGGAGACATGGAAATACAATAGGTCTCTTTTTCATTCAATTTTCAAACAAAAAGATTTTGAACTTTTTCAAGAAAAAATTATTCAAAACAAGCTGGAGAGAAGCTTGATTCCTTTGTTGGATCATGTTCAACGACAAGGGTTGGTGGTTGATTTACAAGATATATTCAACCGTTTCACATTCGACAACATTTGTTCGATAGTTCTTGGATGCGATCCAAATTGTCTTTCCATTGAGTTTCCTGATGTTGCTTGTGAGAAGGCTTTTAACCAAATTGAAGAGTGCATATTCTATAGACATAAAGTGCCTAAAAGTTTTTGGAAGTTGCAAAAATGGCTTCAAATTGGTGAAGAGAGAAACATGACCAATGCATGCAAAACCTTTGATCAATTTATATATGCAAATATAGAGTCCAAAAGAGAGGAGCTAAGAAAAAGTAGCAAAAATATTGAAATGGTTGATTTGCTAACGACTTTGATGAAAGAAGATAACGGATCGCAATCGCAAGTCGTGGTACACGATGACAAGTTTCTAAGAGATGTTGCTTTCAATCTCTTTGTAGCGGGAAGAGATACAATAACTTCAGCACTCACATGGCTCTTTTATCTTATTGCTACACATCCTTTAGTAGAAGCTAAAATTCTTGAAGAGATTAAAGAAAATTTTGGAGGTATTAATATTGGAAAAAAGTTAGGAGTTGATGAGGTGAAAAAGCTAGTTTATCTTCATGGTGCTATATGTGAGGCTGTGAGGCTTTTTCCTCCTATACCTTTTGAGAGAAAGCAAGCAATAAAAGATGATATACTTCCAAGTGCCACTTTGTTAATCCTAATACAACTATATATTTTCTTTGTATTCAATGGGGAGAGTTGA 1245 0.3542 MINIMFSYTSMIFALFFFLCIIFQIHRQHHCKYPVLIDYPFLGMLPPVLWNLWRVHDFVTEALKKQHRGTAEFMGPWFTNMNYLVTSDPINVHHMMSKCFENYVKGDEFHEIFEAFGDGIFASDSETWKYNRSLFHSIFKQKDFELFQEKIIQNKLERSLIPLLDHVQRQGLVVDLQDIFNRFTFDNICSIVLGCDPNCLSIEFPDVACEKAFNQIEECIFYRHKVPKSFWKLQKWLQIGEERNMTNACKTFDQFIYANIESKREELRKSSKNIEMVDLLTTLMKEDNGSQSQVVVHDDKFLRDVAFNLFVAGRDTITSALTWLFYLIATHPLVEAKILEEIKENFGGINIGKKLGVDEVKKLVYLHGAICEAVRLFPPIPFERKQAIKDDILPSATLLILIQLYIFFVFNGES* 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g1240 414 Gene3D Cytochrome P450 41 400 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa1g1240 414 PRINTS E-class P450 group I signature 301 318 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa1g1240 414 PRINTS E-class P450 group I signature 321 347 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa1g1240 414 Pfam Cytochrome P450 47 392 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa1g1240 414 SUPERFAMILY Cytochrome P450 39 394 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa1g1240 414 PANTHER CYTOCHROME P450 FAMILY PROTEIN 12 405 - -
Psa1g1240 414 PANTHER CYTOCHROME P450 12 405 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g1240 Psa-Chr1 83421558 83423351 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g1240 1 396 Cytochrome P450 AT2G23180 42.680 4.06e-106 321
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g1240 - - aprc:113867564 543.888