Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g1238 ATGATCACGCTAACAATATCTCTAGCTGTGTCTGCCACACTAATCCTCACTTCATTCCTATATGCTTTTTACCAAACACTATGCCTCAAAAATCCTGCCTTCACAAATTGGCCTTTTATTGGCATGTTACCACAATTTATTTGGAACATGTCACATATTCATGAGTTTTCAACACAAATGTTGAAATCAAAAGGTGGCACAGTTGAATTTATAGGACCTTGGTTTACCAACATGAAGGGAATAATCACAACTGATCCAATGAATGTTCACCACATCATGAGCAAGAGATTCGACAACTTTGTAAAAGGTAATTTGTTTCGTGAAACGTTCCAACCTTTTGGTGAAGGAATTTTCACTACCGATTCACATAAATGGAAATATAATAGAAACCTTGTCCAACGTCTCTTTAAACAGAAAAGCTTTGAAACTTTTCAAGAGAAAATCATTCACAACAAAGTTGAAACATCATTGATTCCTTTATTGAATCATGTTCAACAACAAGATGGATCCGTGGTCGATTTACAAGACGTCTTCAATCGTTTCACATTTGACAATATATGTTTAATAGTTCTCGGACATGATCCAAATTGTCTTTCAACTGATTTTCCCGAAGTTGCGTATGAGAAGGCTTTTAACCAAGCCGAGGAATCCATCTTCTATCGACACACCATGCCACGTTATATTTGGAGATTGAAAAGATGGCTTCAAATAGGGGAAGAGAAAAAAATGGTCGAGGCGTGCAAAATATTCGATAAATTCCTATTTTCATGTATAGCATCAAAGCGTGAAGAGGTTAGAAAAAATTTCAACACAAATGAAATCAATGTTATCAACGTTGAAACTAACGATGAAGCTTGTCATATTGATTTTCTGACGATGATGATTATAGAAGAAGAAAAAACAAAGGGTAGTGAAAGTGAATTTAGTGGAGACAAGTTTCTACGAGATGTTGTATTCAATCTCTTTGTAGCAGGAAGAGATACTATAACTTCAGCGCTTACATGGTTCTTTTATCTCATCGCTACACACCCTTTAGTGGAAGCAAAGATTCTCGAAGAGATAAAAGAAAATTTTGGACACAAAGAGAAGCCTTGGGTTTTAAGCGTCGATGAGGTGAAAAAACTCGTTTATCTCCATGGAGCTATATGTGAGGCGTTAAGGCTTTTTCCGCCGGTGCCATTTGAGAGAAAGGAAACGATTAAATCCGACATACTTCCAAGTGGTCATCATGTTTATCCAAAAACAATGATATTGTTTTCTGTGTATGCAATGGGAAGGGTTGAAGATATTTGGGGAGAAGATTGCTTGGAGTTCAAGCCAGAAAGGTGGATTTCGGAGAGAGGAGGTATTGTTTATGAGCCATCGTATAAGTTCTTTAGTTTTAATGCTGGACCTAGGACTTGTTTGGGAAAAGATTTGGCTTTCATTCAAATTAAGATGGTTGTTGCTTCTATTTTGTGGAACTATTGTGTTCATGTTGTGGAAGGTAGTTGTGTTACCCCTAACCTTTCAATTGTACTTCTCATGAAACATGGTCTTAAAGTTAGGATAACCAAAAGAGAGATTTAG 1569 0.3658 MITLTISLAVSATLILTSFLYAFYQTLCLKNPAFTNWPFIGMLPQFIWNMSHIHEFSTQMLKSKGGTVEFIGPWFTNMKGIITTDPMNVHHIMSKRFDNFVKGNLFRETFQPFGEGIFTTDSHKWKYNRNLVQRLFKQKSFETFQEKIIHNKVETSLIPLLNHVQQQDGSVVDLQDVFNRFTFDNICLIVLGHDPNCLSTDFPEVAYEKAFNQAEESIFYRHTMPRYIWRLKRWLQIGEEKKMVEACKIFDKFLFSCIASKREEVRKNFNTNEINVINVETNDEACHIDFLTMMIIEEEKTKGSESEFSGDKFLRDVVFNLFVAGRDTITSALTWFFYLIATHPLVEAKILEEIKENFGHKEKPWVLSVDEVKKLVYLHGAICEALRLFPPVPFERKETIKSDILPSGHHVYPKTMILFSVYAMGRVEDIWGEDCLEFKPERWISERGGIVYEPSYKFFSFNAGPRTCLGKDLAFIQIKMVVASILWNYCVHVVEGSCVTPNLSIVLLMKHGLKVRITKREI* 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g1238 522 SUPERFAMILY Cytochrome P450 34 520 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa1g1238 522 PRINTS P450 superfamily signature 324 341 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa1g1238 522 PRINTS P450 superfamily signature 380 391 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa1g1238 522 PRINTS P450 superfamily signature 459 468 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa1g1238 522 PRINTS P450 superfamily signature 468 479 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa1g1238 522 PANTHER CYTOCHROME P450 FAMILY PROTEIN 11 520 - -
Psa1g1238 522 Pfam Cytochrome P450 33 510 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa1g1238 522 PANTHER CYTOCHROME P450 11 520 - -
Psa1g1238 522 Gene3D Cytochrome P450 30 521 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa1g1238 522 PRINTS E-class P450 group I signature 313 330 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa1g1238 522 PRINTS E-class P450 group I signature 333 359 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa1g1238 522 PRINTS E-class P450 group I signature 458 468 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa1g1238 522 PRINTS E-class P450 group I signature 468 491 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa1g1238 522 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 461 470 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g1238 Psa-Chr1 83412511 83414647 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g1238 2 521 Cytochrome P450 AT2G23180 44.592 3.72e-162 469
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g1238 - - gmx:100779590 667.151