Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g1237 ATGATCATGCTATCAACTTTTCTAGCTCTGGCTATCACACTCATCCTCCCCTTATTCCTATATGATTTTTATCAAACACTATATCTCAAAACTCCTGCCTTCACAAATTGGCCTTTTGTTGGTATGCTACCAAGATTCCTTTGGAACATTTCACGTATTCATGAATTTCAAGTTCAATTGTTGAAATCAAAAGGTGGCACAGTTGAGTTCTTAAGACCTTGGTTTACCAAAATGAAAACTGTAATCACAGCTGATCCACGGAATGTCCACCACATTATGAGCAAGAGTTTCGACAACTTTGTGAAAGGTGATTTATTTCGCGAAATGTTTCAAGCTTTTGGTGAAGGTATTTTCACTACTGATTCAATTCAATGGAAATACCATAGGAATCTTCTTCAATATCTATTCAAACAAAGGAGCTTTGAAGCTTTTCAAGAGAAAGTCATTCACAACAAAGTTGAGAAATCATTGATTCCGCTACTCAATCATGTTCAACAACTAGGGTTGATGGATGATTTACAAGATATTTTCAATCGCTTTACATTTGATAATATTTGTTTGATAGTTCTTGGAAATGATCCTAATTGTCTTTCCTTAGATTTCCCTGAAATCGCGGTTGAGAAGGCTTTTAACCAAGCCGAAGAATCCATCTTCTATAAACACACTGTGCCAAAATTTGTTTGGAGGTTGCAAAGATGGCTTCAAATCGGCGAAGAGAAAAAAATGACTGAGGCATGCAAAGTATTTGACAAATTTCTATACGATTGTATAGCTTCAAAGTGTGAAGAGCTTTTGAAAAATTGCAACAAAAATGAAGATGATGCTAAAAGTGAGAAAAATCATCATATTGATTTTCTAACCGCGATGATTGGAGAAGAAAAATCAAAGGCGAGTGAAAATGGTGACAAATTTCTAAGAGATTTTGCCTTCAATCTCTTTGTGGCCGGGAGAGATACTATAACTTCCGCGCTTACATGGTTATTTTATCTCATTGCTACACATCCTTTAGTGGAAACCAATATTCTCAAAGAGATAAAAGAAAACTTTGGACACAAAGAGAAGCCTTGGGTTTTAAGTGTCGATGAGACGAAAAAGCTTGTTTATCTCCATGGTGCTATATGTGAGTCGTTAAGGCTTTTTCCACCTGTACCCTTTGAGAGAAAGGAAGCAATTAAACCTGATATACTTCCAAGTGGTTATCATGTTTATCCTAATACAATGATATTGGTTTCTATATATGCAATGGGAAGGTATGAAGATATTTGGGGAAAAGATTGCTTGGAGTTCAAGCCAGAGAGATGGATTTCGGAGTGGGGAGGCATTAATTATGTGCCTTCTTACAAGTTCTTTAGTTTTAATGCTGGGCCTAGAACTTGTTTGGGAAGAGACTTGGCCTTTATTCAAATTAAGATGGTGGTTGCTTCTATTTTGTGGAACTATTGTGTCCATGTTGTGGAAGATAATTATATTATTCCTAACCTTTCAATTATACTTCTCATGAAACATGGTCTCAAGGTTAAGATAACCAAAAGGGGAATTTAG 1542 0.3593 MIMLSTFLALAITLILPLFLYDFYQTLYLKTPAFTNWPFVGMLPRFLWNISRIHEFQVQLLKSKGGTVEFLRPWFTKMKTVITADPRNVHHIMSKSFDNFVKGDLFREMFQAFGEGIFTTDSIQWKYHRNLLQYLFKQRSFEAFQEKVIHNKVEKSLIPLLNHVQQLGLMDDLQDIFNRFTFDNICLIVLGNDPNCLSLDFPEIAVEKAFNQAEESIFYKHTVPKFVWRLQRWLQIGEEKKMTEACKVFDKFLYDCIASKCEELLKNCNKNEDDAKSEKNHHIDFLTAMIGEEKSKASENGDKFLRDFAFNLFVAGRDTITSALTWLFYLIATHPLVETNILKEIKENFGHKEKPWVLSVDETKKLVYLHGAICESLRLFPPVPFERKEAIKPDILPSGYHVYPNTMILVSIYAMGRYEDIWGKDCLEFKPERWISEWGGINYVPSYKFFSFNAGPRTCLGRDLAFIQIKMVVASILWNYCVHVVEDNYIIPNLSIILLMKHGLKVKITKRGI* 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g1237 513 Coils Coil 258 278 - -
Psa1g1237 513 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 452 461 IPR017972 GO:0005506|GO:0016705
Psa1g1237 513 SUPERFAMILY Cytochrome P450 28 511 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa1g1237 513 Pfam Cytochrome P450 33 506 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa1g1237 513 Gene3D Cytochrome P450 23 512 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa1g1237 513 PANTHER CYTOCHROME P450 10 511 - -
Psa1g1237 513 PRINTS P450 superfamily signature 315 332 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa1g1237 513 PRINTS P450 superfamily signature 371 382 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa1g1237 513 PRINTS P450 superfamily signature 450 459 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa1g1237 513 PRINTS P450 superfamily signature 459 470 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa1g1237 513 PRINTS E-class P450 group I signature 304 321 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa1g1237 513 PRINTS E-class P450 group I signature 324 350 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa1g1237 513 PRINTS E-class P450 group I signature 449 459 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa1g1237 513 PRINTS E-class P450 group I signature 459 482 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa1g1237 513 PANTHER CYTOCHROME P450 FAMILY PROTEIN 10 511 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g1237 Psa-Chr1 83373380 83374921 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g1237 2 512 Cytochrome P450 AT2G23180 42.913 8.14e-151 439
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g1237 - - aprc:113867564 642.499