Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g1236 ATGATCATGCTATCAACTTTTCTAGTTATGGCTATCACATTCATCCTCCCCTTATTCCTATATGCTTTTTACCAAACACTATATCTCAAAACTCCTGCTTTCACAAATTGGCCTTTTGTTGGTATGCTACCAAGATTCCTTTGGAATGTTTCACGTATTCATGATTTTCAAGCCCAGTTGTTGAAATCAAAAGGTGGCACAGTTGAGTTCTTAGGACCTTGGTTTACCAAAATGAAAGTTGTAATCACAGCCGATCCACAGAATGTCCACTACATTATGAACAAGAGTTTCGACAACTTTGTGAAAGGTGATTTATTTCGCGAAATTTTTCAAGCCTTTGGTGAAGGTATTTTCACTACTGATTCAATTCAATGGAAATACCATAGGAATCTTCTCCAATATATTTTCAAACAAAATAACTTTGAAGCTTATCAAGAGAAAGTCATTCACAACAAAGTTGAAAAATCATTGATTCCTTTATTGAATCATGTTCAACAACAAAAAGAGTTGGTTGTCGATTTACAAGATATTTTCAATCGCTTCACGTTTGATAATATTTGTTTGATAGTTCTTGGAAATGATCCTAATTGTCTTTCCTTAGATTTCCCTAAAATCGCGGTTGAGAAAGCTTTTAACCAAGCAGAAGAATCCATCTTCTATAGACACACTATGCCGGGGTTTGTTTGGAGGTTGCAAAGATGGCTTCAAATCGGTGAAGAGAAGAAAATGACTGAGGCATGCAAAGTATTTGACAAATTTCTATATGATTGTATAGCTTCAAAGCACAAAGAGCTTTTGAAAAATTGCAACAAAAATGAAGATGATTCTAAAAGTGAGAAAAATCATCATGTTGATTTGCTAAGCGCGATGATTAGAGAAGAAAAATCAAAGGGGAGTGAAAATGGTGACAAATTTCTAAGAGATTCTGCCTTCAATCTCTTTGTGGCCGGGAGAGATACTATAACTTCCGCGCTTACATGGTTATTTTATCTCATTGCTACGCATCCTTTAGTGGAAACCAATATTCTGAAAGAGATAAAAGAAAATTTTGGACACAAAGAGAAGCCTTGGGTTTTAAGTGTCGATGAGACGAAAAAGCTTGTTTATCTTCATGGTGCTATATGTGAGGCGTTAAGGCTTTTTCCGCCGGTACCTTTTGAGATAAAAGAAGCAATTAAAGCAGACATACTTCCAAGTGGTCATCGTGTTCATCCTAATAAAATGATATACTTTTCCTTATATGCAATGGGAAGGTTTGAAGATATTTGGGGAAAAGATTGCTTGGAGTTCAAGCCAGAGAGGTGGATTTCTGAGAGAGGAGGCAATGTTTATGTTCCATCTTACAAATTCTTTAGCTTTAATGCTGGACCTAGGACTTGTTTGGGAAGAGACTTGGCTTTTCTTCAAGTTAAGATGGTGACTGCTTCTATTTTGTGGAATTATTGTGTTCATGTTAAGGAAGGTAGTTGTGTCACTCCAAGCCTTTCAATTGTACTTCTCACAAAAGAAGGTCTCAATGTTAAGATAACAAAAAGAAAAAATTAG 1545 0.3573 MIMLSTFLVMAITFILPLFLYAFYQTLYLKTPAFTNWPFVGMLPRFLWNVSRIHDFQAQLLKSKGGTVEFLGPWFTKMKVVITADPQNVHYIMNKSFDNFVKGDLFREIFQAFGEGIFTTDSIQWKYHRNLLQYIFKQNNFEAYQEKVIHNKVEKSLIPLLNHVQQQKELVVDLQDIFNRFTFDNICLIVLGNDPNCLSLDFPKIAVEKAFNQAEESIFYRHTMPGFVWRLQRWLQIGEEKKMTEACKVFDKFLYDCIASKHKELLKNCNKNEDDSKSEKNHHVDLLSAMIREEKSKGSENGDKFLRDSAFNLFVAGRDTITSALTWLFYLIATHPLVETNILKEIKENFGHKEKPWVLSVDETKKLVYLHGAICEALRLFPPVPFEIKEAIKADILPSGHRVHPNKMIYFSLYAMGRFEDIWGKDCLEFKPERWISERGGNVYVPSYKFFSFNAGPRTCLGRDLAFLQVKMVTASILWNYCVHVKEGSCVTPSLSIVLLTKEGLNVKITKRKN* 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g1236 514 Pfam Cytochrome P450 33 506 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa1g1236 514 PANTHER CYTOCHROME P450 FAMILY PROTEIN 9 511 - -
Psa1g1236 514 PRINTS P450 superfamily signature 316 333 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa1g1236 514 PRINTS P450 superfamily signature 372 383 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa1g1236 514 PRINTS P450 superfamily signature 451 460 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa1g1236 514 PRINTS P450 superfamily signature 460 471 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa1g1236 514 PANTHER CYTOCHROME P450 9 511 - -
Psa1g1236 514 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 453 462 IPR017972 GO:0005506|GO:0016705
Psa1g1236 514 Gene3D Cytochrome P450 28 514 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa1g1236 514 PRINTS E-class P450 group I signature 305 322 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa1g1236 514 PRINTS E-class P450 group I signature 325 351 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa1g1236 514 PRINTS E-class P450 group I signature 371 389 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa1g1236 514 PRINTS E-class P450 group I signature 450 460 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa1g1236 514 PRINTS E-class P450 group I signature 460 483 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa1g1236 514 SUPERFAMILY Cytochrome P450 32 512 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g1236 Psa-Chr1 83193782 83195499 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g1236 2 514 Cytochrome P450 AT2G23180 43.327 1.47e-154 449
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g1236 - - gmx:100779590 649.432