Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g1231 ATGATAATGCTAGCACCATTTCTAGCTATGGCTGTCACACTCATTCTCACCATATTTCTATATGGTTTTTGCCAAACACTATATCTCAAAACTCCTGCATTCACAAATTGGCCTTTTATTGGTATGCTACCAAGATTCCTTTGGAATGTTTCACAAGTTCATGAATTTTCAGCTCATTGGTTGAGAGTCAAAGGTGGCACTGTTGAATTCCTAGGACCTTGGTTTACCAACATGGATGTTGTAATCACAGCTGATCCAATGAATGTCCACCACATTATGAGCAAGAGTTTCGACAACTTTGTCAAAGGCGATTTGTTTCGCGAAATGTTTCAAGCTTTTGGTGAAGGTATTTTCACTACCGATTCACTTCAATGGAAATACCATAGGAATCTTCTCCAATATCTTTTCAATAGAAGCTTTGAGTCATTTCAAGAGAGAATCATTCACAACAAAGTCGAGAAATCGTTGATTCCACTATTGAATCATGTCGTTCTACAACACAAAAACTCGATGGTCGATTTGCAAGATGTTTTCAACCGCTTCACGTTTGATAACATTTGTTTGATAATTCTCGGACATGATCCTAATTGTCTTTCCGTAGATTTCCCTGAAGTCGCGGTCGAGAAGGCTTTTAACCAAGCTGAAGAATCCATCTTCTATAGACACATTGTGCCGGAATGTGTTTGGAAGTTGCAAAAATGGCTTCAAATTGGCAATGAGAAAAAAATGACCGAGGCATGCAAAATATTTGATAAATTTCTATACGATTGTATAGCTTCAAAGCGCAAAGAGCTTATGAGTATGAAAAATTGTAACGAAAATGCTGAAAGTGAGAAAAACCAACATGTTGATTTGCTAACCGCGATGGTTGGAGAAGAAAAATCAAAGGGGAGTGAAGTTGGCGACAAGTTTCTAAGAGATTCCGCGTTCAATCTCTTTGTTGCGGGAAGAGATACTCTAACTTCCGCGCTTACATGGTTATTTTATCTCATTGCTACACATCCTTCAGTGGAAACCAATATTCTCAAAGAGATAAAAGAAAAATTCGGACACAAAGAGAAGCCTTGGGTTTTAAGTGTGGACGAGACGAAAAAGCTTGTTTATCTTCATGGTGCTATATGTGAGGCGCTAAGGCTTTTTCCACCTATACCTTTTGAGAGAAAGGAAGCAGTTAAACCTGATATACTTCCAAGTGGTCACCATGTTTATCCTAGAAAAATGATACTGTTTTCTTTGTATGCCATGGGAAGGTTTGAAGATACTTGGGGAAAAGATTGTAGAGAGTTCAAGCCAGAGAGGTGGATTTCTGAGAGAGGAGGCAATGTTTATGTTCCATCTTACAAATTCTTTAGCTTTAATGCTGGTCCTAGGACTTGTTTGGGAAGAGACTTAGCTTTCATTCAAATTAAGATGGTGGCTGCTTCTGTTTTGTGGAACTATTGTGTTCATGTTGTGGAAGGTACTTGTGTTACTCCAAGCCTTTCAATTGTACTTCTCACAAAAGAAGGTCTCAAGGTTAAGATAACCAAAAGGGTGTAG 1539 0.3847 MIMLAPFLAMAVTLILTIFLYGFCQTLYLKTPAFTNWPFIGMLPRFLWNVSQVHEFSAHWLRVKGGTVEFLGPWFTNMDVVITADPMNVHHIMSKSFDNFVKGDLFREMFQAFGEGIFTTDSLQWKYHRNLLQYLFNRSFESFQERIIHNKVEKSLIPLLNHVVLQHKNSMVDLQDVFNRFTFDNICLIILGHDPNCLSVDFPEVAVEKAFNQAEESIFYRHIVPECVWKLQKWLQIGNEKKMTEACKIFDKFLYDCIASKRKELMSMKNCNENAESEKNQHVDLLTAMVGEEKSKGSEVGDKFLRDSAFNLFVAGRDTLTSALTWLFYLIATHPSVETNILKEIKEKFGHKEKPWVLSVDETKKLVYLHGAICEALRLFPPIPFERKEAVKPDILPSGHHVYPRKMILFSLYAMGRFEDTWGKDCREFKPERWISERGGNVYVPSYKFFSFNAGPRTCLGRDLAFIQIKMVAASVLWNYCVHVVEGTCVTPSLSIVLLTKEGLKVKITKRV* 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g1231 512 Coils Coil 258 278 - -
Psa1g1231 512 PRINTS P450 superfamily signature 315 332 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa1g1231 512 PRINTS P450 superfamily signature 371 382 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa1g1231 512 PRINTS P450 superfamily signature 450 459 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa1g1231 512 PRINTS P450 superfamily signature 459 470 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa1g1231 512 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 452 461 IPR017972 GO:0005506|GO:0016705
Psa1g1231 512 Gene3D Cytochrome P450 25 512 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa1g1231 512 Pfam Cytochrome P450 35 507 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa1g1231 512 PANTHER CYTOCHROME P450 FAMILY PROTEIN 11 510 - -
Psa1g1231 512 PRINTS E-class P450 group I signature 304 321 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa1g1231 512 PRINTS E-class P450 group I signature 324 350 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa1g1231 512 PRINTS E-class P450 group I signature 449 459 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa1g1231 512 PRINTS E-class P450 group I signature 459 482 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa1g1231 512 PANTHER CYTOCHROME P450 11 510 - -
Psa1g1231 512 SUPERFAMILY Cytochrome P450 32 511 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g1231 Psa-Chr1 83040834 83042925 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g1231 2 511 Cytochrome P450 AT2G23180 43.798 1.25e-153 446
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g1231 - - gmx:100779590 656.366