Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g1230 ATGATCATGTTAATATCATTTCTAGCTATGGCTATCACACTCATTCTCCCCTTATTCCTATATGCATTTTATCAAACACTATATCTCAAAACTCCAGCCTTCACAAATTGGCCTTTTGTTGGTATGCTACCAAGATTCCTTTGGAACGTTTCACGTATTCATGATTTTCAAGTACAATTGTTGAAATCAAAAGGTGGCACAGTTGAGTTTCTAGGACCTTGGTTTACCAAAATGAAAGCTGTAATCACAGCTGATCCACAGAATGTCCACCACATTATGAGCAAGAGTTTCGACAACTTTGTGAAAGGTGATTTGTTTCGCGAAATGTTTCAAGCTTTTGGTGAAGGTATTTTCACTACTGATTCAATTCAATGGAAATATCATAGGAATCTTCTTCAATATCTATTCAAACAAAAGAGCTTTGAAGCTTTTCAAGAGAGAGTCATTCACAACAAAGTTGAAAAATCATTGATTCCGCTACTCAATCATGTTCAACAACTAGGGTTGATGGTTGATTTACAAGATATTTTCAATCGTTTCACCTTTGATAATATTTGTTTGATAGTTCTTGGAAATGATCCTAATTGTCTTTCCTTAGATTTTCCTGAAATCGCGGTTGAGAAGGCTTTTAACCAAGCTGAAGAATCCATCTTCTATAGACACACTGTGCCGGGGTTTGTTTGGAGGTTGCAAAGATGGCTTCAAATTGGCGAAGAGAAAAAAATGACTGAGGCATGCAGAGTCTTTGACAAATTTCTATATGATTGTATAGCTTCAAAGCGCAAAGAGCTTTTGAAAAATTGCAACAAAAATGAAGATGATGTTAAAAGTAAGAAAAATCATCACGTTGATTTGCTAACCGCGATGATTGGAGAAGAAAAATCAAAGGGGAGTGAAGTTGGTGACAAGTTTCTAAGAGATTCTGCCTTCAATCTCTTTGTGGCCGGGAGAGATACTATAACTTCCGCGCTTACATGGTTATTTTATCTAATTGCTATGCATCCTAGAGTGGAAACCAATATTCTCAAAGAGATAAAAGAAAAATTTGGACACAAAGAAAAGCCTTGGGTTTTAAGTGTCGATGAGACGAAAAAACTTGTTTATCTTCATGGTGCTATATGTGAGGCGTTAAGGCTTTTTCCGCCGGTACCTTTTGAGAGAAAGGAAGCAATTAAAGCAGATATACTTCCAAGTGGTCATCATGTTCATCCTAATAAAATGATATTCTTTTCCTTATATGCAATGGGAAGGTTTGAAGATATTTGGGGAAAAGATTGCTTGGAGTTCAAGCCAGAGAGGTGGATTTCTGAGAGAGGAGGCAATGTTTATGTTCCATCTTACAAATTCTTTAGCTTTAATGCTGGTCCTAGGACTTGTTTGGGAAGAGATTTGGCTTTTCTTCAAGTTAAGATGGTGACAGCTTCTATTTTGTGGAATTATTGTGTTCATGTTAAGGAAGGTACTTGTGTTACTCCAAGCCTTTCAATTGTACTTCTCACAAAAGAAGGTCTCAATGTTAAGATAACAAAAAGAAAAAATTAG 1542 0.3619 MIMLISFLAMAITLILPLFLYAFYQTLYLKTPAFTNWPFVGMLPRFLWNVSRIHDFQVQLLKSKGGTVEFLGPWFTKMKAVITADPQNVHHIMSKSFDNFVKGDLFREMFQAFGEGIFTTDSIQWKYHRNLLQYLFKQKSFEAFQERVIHNKVEKSLIPLLNHVQQLGLMVDLQDIFNRFTFDNICLIVLGNDPNCLSLDFPEIAVEKAFNQAEESIFYRHTVPGFVWRLQRWLQIGEEKKMTEACRVFDKFLYDCIASKRKELLKNCNKNEDDVKSKKNHHVDLLTAMIGEEKSKGSEVGDKFLRDSAFNLFVAGRDTITSALTWLFYLIAMHPRVETNILKEIKEKFGHKEKPWVLSVDETKKLVYLHGAICEALRLFPPVPFERKEAIKADILPSGHHVHPNKMIFFSLYAMGRFEDIWGKDCLEFKPERWISERGGNVYVPSYKFFSFNAGPRTCLGRDLAFLQVKMVTASILWNYCVHVKEGTCVTPSLSIVLLTKEGLNVKITKRKN* 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g1230 513 PANTHER CYTOCHROME P450 FAMILY PROTEIN 10 510 - -
Psa1g1230 513 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 452 461 IPR017972 GO:0005506|GO:0016705
Psa1g1230 513 PANTHER CYTOCHROME P450 10 510 - -
Psa1g1230 513 Gene3D Cytochrome P450 23 513 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa1g1230 513 PRINTS P450 superfamily signature 315 332 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa1g1230 513 PRINTS P450 superfamily signature 371 382 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa1g1230 513 PRINTS P450 superfamily signature 450 459 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa1g1230 513 PRINTS P450 superfamily signature 459 470 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa1g1230 513 Pfam Cytochrome P450 33 505 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa1g1230 513 PRINTS E-class P450 group I signature 304 321 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa1g1230 513 PRINTS E-class P450 group I signature 324 350 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa1g1230 513 PRINTS E-class P450 group I signature 449 459 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa1g1230 513 PRINTS E-class P450 group I signature 459 482 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa1g1230 513 SUPERFAMILY Cytochrome P450 32 511 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g1230 Psa-Chr1 83016245 83018402 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g1230 2 513 Cytochrome P450 AT2G23180 43.798 5.86e-157 455
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g1230 - - gmx:100779590 655.981