Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g1173 ATGTCTCGGTTGAATTCAGAAAAGAAACTCGGTGCAGGTCGTGTTGTTGCTGTTGCTATTGAGAATAACAAAACAAGCCAACATGCTGCTAAATGGGCCGTTGAAAATCTTCTTCCTAAAGATCAATGCCTCTATCTCGTTCATGTTAAATCAAAAACTAATTCTTCAACTTCCGTCTCATCATCGTCGTCTGGAAGCTATGCAGGTAACGGCGATGTAAACGAAGATACTATTGATAGCGAATCAAAAGATCTTTTCGACTCCTTCCGTGTTTTCTGCAATAGAAAAAGCATACAATGCAAAGAAGTGTTGTTGGAGGATGCAGATATATCAAAGGCATTGACAGATTGCATTTCGACTCTTTGTATTGAGCTTCTTGTGTTAGGAGCATCATCAAGAGGTGGCATTGTTAGAAGATTTAGGACTACGGATGTTCCAACCACTGTTTCAAAAGCAGCACCACCATTCTGCACTGTATATATAATATCTAAAGGAAAAATTTCGACGGTTAGATCCGCAACGGCTCCAATTCCAAAACCAGCCGTGCCGGTCGCGGCGTCTATGATTGCGCCACCAACACCGTCGCGTAATCAACAGTTTCAACAGCAATATGCAATGCCGACTCGAAGTCCCGAAAGATCCGACCCTCAGTTGACCAGAAACTACCCGCCGCGACCTGTATCAGATAGGCATGCAACATATGGGATGCGGCAGGGGCTCGATGATGAACAAGAAATGATATCACCGTTCAACAGGAGAGGACACAAAGCGTACGAGTCATCGGTTCCTGATTCAGATATATCATTTGTGAGCAGTGGAAGGCCGAGTATTGATCGAATATTCCCTTTGATGTATAACATGGAAGATCTGGCCACTAGTATTAGTAGTGGAACTCCCACCGGGAGGCTTTCAGATTTTGATGCAAGAAGCAGCTTTGCTTCGTCGTATTCTGGAGGAGGAGGAGGAGAAAAGTCCATTGACATGTCTTCTCCTTTGGATAACTATTCATTCAGCTCCCAAAGCAGTGGTGGTGGTCTTTCTTCATCGAGGTTATCTGATGCCGGAGATGAAGTCGAAGCAGAGATGAGGAGGCTTAAGCTTGAACTCAAACAAACTATGGAAATGTACAGTTCAGCTTGTAAGGAAGCACTCTCAGCCAAACAGAAGGCACTAGAACTTCAACGATGGAAATCCGAAGAAGAAAAGAAGTTGGAAGAGGCGAGAGAAGGTGAAGGAGCAGCTCTGGCTATGGTAGAGTTGGAGCAAGAAAAGTGTAAAGCTGCACTCAAGGCAGCGGAAGCATCTCAGAGAATCGCAACATTGGAAGCACAAAAGCGAATGAACGTAGAAAGAAAAAGCGAAATAGAAGCAAGTCAGAGGAGAAAATCTGACGATTCTTATAGTCCAAGACATACCACTGCCAGATATAGAAGATACAGTATTGAGGAAATTGAAGATGCAACAGAGAGATTTTCAGACAGTCTCAAAATTGGTGAAGGAGGGTATGGTCCTGTTTTCAGATGTGAACTTGATCATACGCAGGTCGCTATCAAAGTGTTGAAATCAGATGCAGCTCAAGGAAGGGCACAGTTTAACCAGGAAGTTGAAGTTTTGAGTTGTATAAGACATCCAAATATGGTGCTTCTGTTAGGAGCATGTCCTGAATTTGGTTGTATAGTGTATGAGTACATGGCTAATGGAAGTTTGGATGATTGTTTGTTCAGGCGAGGAAAGGCTCCCCCTCTTCCTTGGCAGTTGAGATTTCAAATTGCGTCCGAGATAGCCACTGGACTCCTTTTCCTTCACCAGGCTAAACCAGAACCGATTGTGCACCGTGACTTGAAACCTGGAAACATTTTGCTTGACCGAAACTATGTGAGCAAGATTGGTGATGTTGGTTTGGCAAGGCTTATTCCTCCTTCTGTTCAAGACACTGTAACTCAGTATCGCATGACTTCGACTGCTGGAACTTTTTGTTACATTGACCCTGAGTACCAGCAAACCGGTATGCTTGGTATCAAATCTGATATTTACTCACTTGGAATCATGCTTTTACAAGTGATTACCGCCAAGCCTCCAATGGGTTTGACTCATCATGTTGGTAGATCTATTGAAAAGGGAACTTTTGCTGACATGCTTGATCCTGCTGTTCAGGACTGGCCTGTTGAACACGCCTTGCATTTCGCCAAACTTTCCCTTCAGTGTGCGGAAATGAGAAGAAAAGATAGACCCGATCTTGGAAAAGTTGTGCTTCCTGAGCTCAACAAACTCAGAATATTCGCCGAAGAAAACATGCCTATGATGATGTTTAGAGGCGGTAGTGCAGCATTCAATCCCAGAAGTACCAACTATTTCATGAATTGCACAGTTTCTACAAATCAAGACATTAGTGAATCGGATTCTTTGTCTGGCAACTCCGGATACGAAAGCCGTTCAAGCACATCATCATTGGGGAGATTGTAA 2463 0.4361 MSRLNSEKKLGAGRVVAVAIENNKTSQHAAKWAVENLLPKDQCLYLVHVKSKTNSSTSVSSSSSGSYAGNGDVNEDTIDSESKDLFDSFRVFCNRKSIQCKEVLLEDADISKALTDCISTLCIELLVLGASSRGGIVRRFRTTDVPTTVSKAAPPFCTVYIISKGKISTVRSATAPIPKPAVPVAASMIAPPTPSRNQQFQQQYAMPTRSPERSDPQLTRNYPPRPVSDRHATYGMRQGLDDEQEMISPFNRRGHKAYESSVPDSDISFVSSGRPSIDRIFPLMYNMEDLATSISSGTPTGRLSDFDARSSFASSYSGGGGGEKSIDMSSPLDNYSFSSQSSGGGLSSSRLSDAGDEVEAEMRRLKLELKQTMEMYSSACKEALSAKQKALELQRWKSEEEKKLEEAREGEGAALAMVELEQEKCKAALKAAEASQRIATLEAQKRMNVERKSEIEASQRRKSDDSYSPRHTTARYRRYSIEEIEDATERFSDSLKIGEGGYGPVFRCELDHTQVAIKVLKSDAAQGRAQFNQEVEVLSCIRHPNMVLLLGACPEFGCIVYEYMANGSLDDCLFRRGKAPPLPWQLRFQIASEIATGLLFLHQAKPEPIVHRDLKPGNILLDRNYVSKIGDVGLARLIPPSVQDTVTQYRMTSTAGTFCYIDPEYQQTGMLGIKSDIYSLGIMLLQVITAKPPMGLTHHVGRSIEKGTFADMLDPAVQDWPVEHALHFAKLSLQCAEMRRKDRPDLGKVVLPELNKLRIFAEENMPMMMFRGGSAAFNPRSTNYFMNCTVSTNQDISESDSLSGNSGYESRSSTSSLGRL* 821
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g1173 820 MobiDBLite consensus disorder prediction 448 470 - -
Psa1g1173 820 ProSitePatterns Serine/Threonine protein kinases active-site signature. 609 621 IPR008271 GO:0004672|GO:0006468
Psa1g1173 820 PANTHER OS02G0152300 PROTEIN 1 819 - -
Psa1g1173 820 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASE-LIKE DOMAIN KINASE 1 819 - -
Psa1g1173 820 Gene3D HUPs 14 162 IPR014729 -
Psa1g1173 820 Coils Coil 355 375 - -
Psa1g1173 820 Pfam Universal stress protein family 14 152 IPR006016 -
Psa1g1173 820 Gene3D Transferase(Phosphotransferase) domain 1 564 766 - -
Psa1g1173 820 MobiDBLite consensus disorder prediction 193 217 - -
Psa1g1173 820 MobiDBLite consensus disorder prediction 337 357 - -
Psa1g1173 820 ProSiteProfiles Protein kinase domain profile. 491 754 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa1g1173 820 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 16 149 - -
Psa1g1173 820 MobiDBLite consensus disorder prediction 193 226 - -
Psa1g1173 820 CDD STK_N 15 165 - -
Psa1g1173 820 Gene3D Phosphorylase Kinase; domain 1 461 563 - -
Psa1g1173 820 MobiDBLite consensus disorder prediction 797 820 - -
Psa1g1173 820 Pfam Protein kinase domain 494 744 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa1g1173 820 SUPERFAMILY Protein kinase-like (PK-like) 466 750 IPR011009 -
Psa1g1173 820 SMART serkin_6 491 760 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g1173 Psa-Chr1 80953532 80960968 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g1173 1 773 Receptor kinase-like Gene Family AT1G78940 52.258 0.0 734
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Psa1g1173 Pkinase 4.8e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g1173 - - cam:101511100 1273.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa1g1173 1 80953532 80960968 Psa1g1173 1 80953532 80960968 ECH