Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g1170 ATGCTTCGTTCTGACCTTGCTAAACCGCCACTCGAAACGGTCGTCTACGAGATTGGTATGTTTAAAAACTCATGTGAACTCGTGGTCAGGGAATTGAAACAATGGATGACACCAGAAAAGTTGATATTTTCAGCTTTTGTTTCTTTGATGATGATCTATGAGTATAATATTAGTATTATTCTTTGTTTTCTAGTGTTGTCCCTTGATCCAGTTGTCGGAGCTATAGCAGCTGGTAATGCTGTGGTTCTAAACTCAGAAATTGCTCCGGCTTCATCTTCACTGCTGGCGAAATTGTTAGGGGGTACTTGGATAACTCGTCTATAA 324 0.4012 MLRSDLAKPPLETVVYEIGMFKNSCELVVRELKQWMTPEKLIFSAFVSLMMIYEYNISIILCFLVLSLDPVVGAIAAGNAVVLNSEIAPASSSLLAKLLGGTWITRL* 108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g1170 107 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 2 99 IPR016162 GO:0016491
Psa1g1170 107 SUPERFAMILY ALDH-like 3 99 IPR016161 GO:0016491
Psa1g1170 107 PANTHER ALDEHYDE DEHYDROGENASE 2 100 IPR012394 GO:0006081
Psa1g1170 107 PANTHER ALDEHYDE DEHYDROGENASE 2 100 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g1170 Psa-Chr1 80748252 80748970 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g1170 2 99 Aldehyde Dehydrogenase Gene Family AT4G34240 49.533 2.56e-21 85.5