Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Psa1g1168 | ATGCTCGCGGCTCCTCTTTTGCAGACATACATCAGACTAACATATCAAAAGTGTAAGCAAAGAACAATAGTCATGAATCACAAGCGAACCAAAGGGTCTAGGCTAGAGAACGCTATCTCACTTTCCAAGCCGATGAGAAAAGTGGCTGGTCGAACCAGTACCATTGGAGAGCCTATAAATGCCGCAGGCTTGTTGTCCGACATGCTACTTAGAGCAGTGAAAGCACATACTCCATATTCATCTCGACTGGCATATTTGCATGCAAAGAACATTGTTCACGGGGACATCAAAGGAGCAAACATATTGGTGGACCCTAATGGACACATAAAACTGGCAGATTTTGGGATGGCTAAGCATATAAGTGGGCAGTCTCTTCCATTTTCTTTTAAAGGAAGTCCTTACTGGATGGCACCTGAGGTTATAAGAAATTCAAATGGTTGTAATCTTGCTGTTGATATACGGAGTCTGGGCTGCACTGTTCTGGAGATGGCAACAACAAAACCACCTTGGAGCCATTATGAAGGGGTTGCCGCTATGTTTAAGATTGGGAACAGCAGGGAACTTCCTAAAATTCCAGATCATCTATCAGAAGAAAGGGAAAGTTTTGTCAGGCTTTGTTTGCAAAGGGATCCAGTAGATCGTCCTTCAGTTGGCCAACTTCTAGAGCACCCATTTGTTAAAAGCGCTTTTCTGGAAAGACTCTTTCTGACCGCCGATCCTTCAGAATCCCCATCTTCTGTTATGAATGCAATGAGATCACTGGCTATTGGGTCGCCTAAACATACACTATGTTTAGACTTTGAAGAAGTAGCTGGTATCCGCGGTATCCCCCCAGCAAGAAACTTCAGAACCGGTTATGAATCAAGTTATGCTAATAAAGCAAGGATTGTCTCATGTCCCGTTTCTCCATCTGATGGACTACGTGTGCCTCCAAGATCAACGAATCCGAGTGGCAGGATATCTCCCACTCTAACGCCTAATCCTCATACCTCATCGGGCCCTTCTACTCCGCAAGTCTGTAGATGTGGGACAAATCCATACTATCAAACAAAGCAACCTATATTCCCTCATGAAGCTCTGGGTATGACCCATAAATCTCCACACTAG | 1107 | 0.4444 | MLAAPLLQTYIRLTYQKCKQRTIVMNHKRTKGSRLENAISLSKPMRKVAGRTSTIGEPINAAGLLSDMLLRAVKAHTPYSSRLAYLHAKNIVHGDIKGANILVDPNGHIKLADFGMAKHISGQSLPFSFKGSPYWMAPEVIRNSNGCNLAVDIRSLGCTVLEMATTKPPWSHYEGVAAMFKIGNSRELPKIPDHLSEERESFVRLCLQRDPVDRPSVGQLLEHPFVKSAFLERLFLTADPSESPSSVMNAMRSLAIGSPKHTLCLDFEEVAGIRGIPPARNFRTGYESSYANKARIVSCPVSPSDGLRVPPRSTNPSGRISPTLTPNPHTSSGPSTPQVCRCGTNPYYQTKQPIFPHEALGMTHKSPH* | 369 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Psa1g1168 | 368 | PANTHER | MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE YODA | 81 | 357 | - | - | |
Psa1g1168 | 368 | ProSiteProfiles | Protein kinase domain profile. | 1 | 226 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Psa1g1168 | 368 | Pfam | Protein kinase domain | 83 | 226 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Psa1g1168 | 368 | PANTHER | MAP KINASE KINASE KINASE SSK2-RELATED-RELATED | 81 | 357 | - | - | |
Psa1g1168 | 368 | MobiDBLite | consensus disorder prediction | 308 | 337 | - | - | |
Psa1g1168 | 368 | SUPERFAMILY | Protein kinase-like (PK-like) | 83 | 260 | IPR011009 | - | |
Psa1g1168 | 368 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 91 | 103 | IPR008271 | GO:0004672|GO:0006468 | |
Psa1g1168 | 368 | MobiDBLite | consensus disorder prediction | 302 | 337 | - | - | |
Psa1g1168 | 368 | Gene3D | Transferase(Phosphotransferase) domain 1 | 60 | 252 | - | - | |
Psa1g1168 | 368 | SMART | serkin_6 | 10 | 226 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Psa1g1168 | Psa-Chr1 | 80273772 | 80277550 | Proximal |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Psa1g1168 | 81 | 358 | MAP Kinase Kinase Kinase | AT1G63700 | 55.872 | 3.11e-94 | 298 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | STE_STE11 | Psa1g1168 | Pkinase | 4.5e-37 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Psa1g1168 | K20717 | - | gmx:100814422 | 387.882 |