Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g1167 ATGAATATCTTAAATTCCTTTTTAAAAAAGTTGCAACATCTTTTTAACACATCATGCCAAAAACTTGCTTGTCTAAGCAAATCAATTTTTTTCTTAGCAGCATGTTTTTGTCGTTTCATCCTCTTAAGAGCAAATCCATTATGGATTCAAATTGTATATTTCACATCTCTTTCCATTTTAGGTTTTGGATTTCTCAAAGCTCTTGACTCTTCTTCTTCACAAACACCACCTAAAAACTTAGATCTATTCTTCACTTCAATTTCAGCCACAACAGTTTCAAGCATGTCAACAATTGAAATGCAAATTTTTTCAAACTCTCAATTAATCATCATCACCATTTTAATGTTCATAGGTGGTGAAATCTTTACATCCATGGTAGGACTCCATTTCATTAGATCAAGACTCAAAACTGATTTAGATAAAATCGCTACGTCTCATGCTCGTCTTGCGTCTCTAAACCCTTTCGTCGTAGATCAAATTCATCTTGAACTTGAAATGGTCACAACAAACACAAACGAGGTACACAATAAATCACATGAATCTTTACATAGTAAATCACATGAATCTTTACATAATATATCACATGAATCTTTGAGTACTACAAATGAAAATTTAAGGTACTTGTCTATGAAATATTTAGGCTATGTAGTTCTTGGTTACATTCTAGTTCTCCATTTTATAGGTATATTTGGAGTGTCTCTTTACCTTACAATTATTCCTAGTACGAAACAAATACTAAAAAACAAGAATCTTAAAATGTTCACATTTTCTGTTTTTACTATAGTTTCAACTTTTGCAAGCTGTGGTTTTGTTCCAACAAACGAAAACATGATTGTTTTTAAGAAAAATTCTGGTCTTCTTCTTATGCTTATTCCACAAGTGCTTCTTGGAAACACATTGTATCCTCCATTTTTGAGATTTTGCATATGGGTGTTGGGAAAATTCTACAAGAAGAAAGAGTGTGGTTATCTTTTGAAGCATTCAGAGGAAGTTGGTTACAAACATTTGTTGAAGGGGAAACATTCTGTGTTTCTTGTGGCTACTGTTTTTGGGTTGCTTGTGGTTCAAGTTACATTGTTTTGTTTAATGGATTGGAATTCAGAAGGTTTGAAGGGGATGAATAATTATGAGAAATTGATTGGTGTATTGTTTCAAAGTATTAATTCAAGACATACTGGAGAAACTATCGTGGATATCTCAATTCTGTCACAAGCCATGTTGGTGTTGTTTGTACTCATGATGTACCTTCCTCCTTACACATCATTCCTCCCATTGAAAGATTCAGAAATTAGCAGTAAGAGGATGAAAAAGACAAGAGGAAAAGTTTCTGAAAATCTGATATTCTCTCAACTCTCCTATTTAACCATTTTCATCATTCTAGTGTGCATAACTGAGAGGAAAAAATTGAAGGAAGATCCTCTCAATTTCAATGTTTTGAATATTGTTCTTGAAGTTATAAGTGCTTATGGGAACGTAGGATTTAGTACAGGATACAGTTGTGAAAGACAATTACATCCAGAAGCAAATTGTGAAAATAAGTGGATTGGGTTTGTTGGAAAATGGAGTGATGAAGGAAAGATTATTCTTATACTTGTTATGTTGTTTGGAAGACTCAAAAAGTTCAATATGGATGGAGGCAAGTCATGGAAACTTCTCTAG 1659 0.3291 MNILNSFLKKLQHLFNTSCQKLACLSKSIFFLAACFCRFILLRANPLWIQIVYFTSLSILGFGFLKALDSSSSQTPPKNLDLFFTSISATTVSSMSTIEMQIFSNSQLIIITILMFIGGEIFTSMVGLHFIRSRLKTDLDKIATSHARLASLNPFVVDQIHLELEMVTTNTNEVHNKSHESLHSKSHESLHNISHESLSTTNENLRYLSMKYLGYVVLGYILVLHFIGIFGVSLYLTIIPSTKQILKNKNLKMFTFSVFTIVSTFASCGFVPTNENMIVFKKNSGLLLMLIPQVLLGNTLYPPFLRFCIWVLGKFYKKKECGYLLKHSEEVGYKHLLKGKHSVFLVATVFGLLVVQVTLFCLMDWNSEGLKGMNNYEKLIGVLFQSINSRHTGETIVDISILSQAMLVLFVLMMYLPPYTSFLPLKDSEISSKRMKKTRGKVSENLIFSQLSYLTIFIILVCITERKKLKEDPLNFNVLNIVLEVISAYGNVGFSTGYSCERQLHPEANCENKWIGFVGKWSDEGKIILILVMLFGRLKKFNMDGGKSWKLL* 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g1167 552 Pfam Cation transport protein 430 508 IPR003445 GO:0006812|GO:0008324|GO:0055085
Psa1g1167 552 Pfam Cation transport protein 199 416 IPR003445 GO:0006812|GO:0008324|GO:0055085
Psa1g1167 552 PANTHER SODIUM TRANSPORTER HKT1 28 551 - -
Psa1g1167 552 PANTHER POTASSIUM TRANSPORT PROTEIN DDB_G0292412-RELATED 28 551 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g1167 Psa-Chr1 80116804 80120171 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g1167 73 551 Inorganic Solute Cotransporters AT4G10310 47.658 5.40e-148 433
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g1167 K24976 - twl:119997267 635.565
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa1g1167 1 80116804 80120171 Psa1g1167 1 80116804 80120171 ECH