Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g1156 ATGAAGAACAACTTTGCCAAAAACTCACAACATCTTTGTACTTTCTTCCCTAACAAATTCCAATTCAACAACTTCTTCATTCAACTCTTTTATTTCATTCTCCTTTCTCTCTTTGGTTACTTGGGCCTCAAGTTTTCAAACCCAAGATCATCTATTAAACCAAATGATTTTGATCTCTTTTACACCTCAGTTTCTGCTTCCACTGTTTCAAGCATGACATCAATAGAAATGGAAGTTTTCTCTAATCCCCAACTCATTCTTCTTACCTTTCTTATGCTACTTGGTGGTGAAGTTTTTACTTCCATGCTTCAACTTTTTCTTGATAGGTTCTTCAATTTCACCCAAAATCATTCTCTCAAAAATGAATCCCCTCCAATTAATATTTATCAAATTGAACTTACACAAAGTGATGATAATAATATTTACAATAAAGATAAAATAAAGTATAATTCTCTTAGGTATTTAAGTTATGTAGTTTTGGCTTATCTTATAATTATTCATTTTTTTGGTTTTCGTTTTGTGACTTTGTACTTAGCCTATATACCAAGTGCAAAACATGTACTAAAAAACAAAGGCATCAAGATAGAAACATTCTCTTTATTTACAATAGTTTCAACATTTGCAAGCTGTGGTTATGTACCAACCAATGAGAACATGATTGTTTTCAAGAAGAATTCAGGTCTTCTTCTTCTTATACTTCCACATACACTTTTAGGTAATACCCTTTATCCATCATGTTTGAGGCTTTTCATAACACTTTTGAAAAATGTTACTAAAAGAGAAGAATTCTCTTACTTGTTGAAGAACACAAAGGAAATGGGTTATGACCATTTGTTATCTCCTCTTCATTGTTGGAACCTTGTTGTCACTGTCTTTGGTTTCATTGTTATTCAATTTGTATTATTCTGTTCCTTGGAGTGGAGTTCGAAGACTATGGAGGGTCTTAATCTCTATCAGAAAGTGGTTGCGTCTTTGTTTCAAGTTACAAACGCTAGGCATTCTGGTGAATCTGTTTTTGATATTTCCACCATCTCTTCAGCTATATTGGTGCTCTTCATTGTCATGATGTATCTCCCACCGTACACCACATTTTTACCTGTAAGGGACCACACAAATATTGATGTGAAGAGAGACCAAAAAAGCTTAGTGGAGTGTCTTGTATTCTCTCAACTCTCATATTTGGTTATTTTCATTATTCTCATTTGCATCACTGAGAGACAAAGCTTAAAAGAAGATCCCCTCAACTTCAATGTCTTAAATATCACCCTAGAAGTTATCAGTGCTTATGGCAATGTAGGGCTGTCGACAGGATATAGCTGCTCAAGACAATTGAAAGCCGATCCAATGTGCAAAGATTCATGGATTGGATTTTCGGGTAGGTGGAGTACAAGAGGGAAGTTTATACTTATCTTGGTCATGTTCTTTGGGAGGCTCAAGAAATTCAATATGAATGGAGGCAAAGCCTGGCACCTCTCCTAG 1479 0.3482 MKNNFAKNSQHLCTFFPNKFQFNNFFIQLFYFILLSLFGYLGLKFSNPRSSIKPNDFDLFYTSVSASTVSSMTSIEMEVFSNPQLILLTFLMLLGGEVFTSMLQLFLDRFFNFTQNHSLKNESPPINIYQIELTQSDDNNIYNKDKIKYNSLRYLSYVVLAYLIIIHFFGFRFVTLYLAYIPSAKHVLKNKGIKIETFSLFTIVSTFASCGYVPTNENMIVFKKNSGLLLLILPHTLLGNTLYPSCLRLFITLLKNVTKREEFSYLLKNTKEMGYDHLLSPLHCWNLVVTVFGFIVIQFVLFCSLEWSSKTMEGLNLYQKVVASLFQVTNARHSGESVFDISTISSAILVLFIVMMYLPPYTTFLPVRDHTNIDVKRDQKSLVECLVFSQLSYLVIFIILICITERQSLKEDPLNFNVLNITLEVISAYGNVGLSTGYSCSRQLKADPMCKDSWIGFSGRWSTRGKFILILVMFFGRLKKFNMNGGKAWHLS* 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g1156 492 Pfam Cation transport protein 383 478 IPR003445 GO:0006812|GO:0008324|GO:0055085
Psa1g1156 492 Pfam Cation transport protein 81 358 IPR003445 GO:0006812|GO:0008324|GO:0055085
Psa1g1156 492 PANTHER POTASSIUM TRANSPORT PROTEIN DDB_G0292412-RELATED 10 492 - -
Psa1g1156 492 PANTHER SODIUM TRANSPORTER HKT1 10 492 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g1156 Psa-Chr1 79223372 79232933 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g1156 44 491 Inorganic Solute Cotransporters AT4G10310 50.533 8.04e-159 459
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g1156 K24976 - gmx:100800875 649.432
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa1g1156 1 79223372 79232933 Psa1g1156 1 79223372 79232933 ECH