Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g1138 ATGGACACCACCACCAACAACAACCATCTTCGATTCCAGGATGCTGATGAAGTTATCGAAGATGCTGCTGAAACTTCCAACCTTGACCAATCAATGGGTGGTTGCGAACTTGATGATTCAAATGACAAAACCAGCGCTGATTACTACTTTGATTCTTACTCTCACTTTGGAATTCATGAAGAAATGTTGAAGGACACTGTTAGAACCAAGACATATCAAAATGTTATTTATCAGAATAGGTTTTTATTCAAGAATAAAGTAGTTCTTGATGTTGGTGCCGGAACTGGGATTTTGTCACTATTCTGTGCCAAAGCAGGTGCAGAACATGTCTATGCCGTTGAATGCTCTGATATGGCTGACATGGCAAAGCAGATAGTTGAAACTAATGGTTACTCTAAAGTTATAACTGTTTTGAAAGGGAAGATTGAAGAACTTGAACTCCCTGTTCCTAAAGTTGATATAATCATTTCTGAATGGATGGGATATTTCTTGTTGTTTGAGAATATGTTAAATTCTGTGCTCTATGCACGCGATAAATGGCTTGTGGATGATGGCGTTGTGCTACCCGATATAGCAACCCTCCATCTGACTGCAATTGAAGATAAAGACTACAAAGAAGATAAAATTGAGTTTTGGAACAATGTATATGGATTTGACATGAGCTGCATCAAGAAGCAAGCCTTGTCAGAGCCTCTTGTTGATACAGTTGACCAGAATCAGATTGCAACAAACTGTCAGCTACTCAAGACAATGGACATCTCAAAAATGTCTTCAGGAGATTGCTCATTCACAGCACCTTTTAAGCTCGTAGCTTCTCGTGACGATTTTATTCATGCTCTCGTGGCGTATTTTGATGTATCATTTACAAAGTGTCATAAATTGATGGGCTTCTCAACAGGGCCAAGATCACGAGGTACACATTGGAAACAAACAGTCCTATATCTGGAAGATGTCTTGACCATTTGTGAAGGGGAGACAATTGTAGGGAGCTTGACTGTTGCACCAAATAAGAAGAATCCGCGCGATGTTGATATAATGCTAAAGTATACATTGAATGGCAGGCGATGCAATGCATCGAGGGTTCAGTATTACAAGATGCGTTAA 1104 0.3958 MDTTTNNNHLRFQDADEVIEDAAETSNLDQSMGGCELDDSNDKTSADYYFDSYSHFGIHEEMLKDTVRTKTYQNVIYQNRFLFKNKVVLDVGAGTGILSLFCAKAGAEHVYAVECSDMADMAKQIVETNGYSKVITVLKGKIEELELPVPKVDIIISEWMGYFLLFENMLNSVLYARDKWLVDDGVVLPDIATLHLTAIEDKDYKEDKIEFWNNVYGFDMSCIKKQALSEPLVDTVDQNQIATNCQLLKTMDISKMSSGDCSFTAPFKLVASRDDFIHALVAYFDVSFTKCHKLMGFSTGPRSRGTHWKQTVLYLEDVLTICEGETIVGSLTVAPNKKNPRDVDIMLKYTLNGRRCNASRVQYYKMR* 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g1138 367 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 36 367 IPR025799 GO:0016274|GO:0018216
Psa1g1138 367 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 52 366 IPR029063 -
Psa1g1138 367 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 46 347 IPR025799 GO:0016274|GO:0018216
Psa1g1138 367 CDD AdoMet_MTases 88 188 - -
Psa1g1138 367 Pfam Ribosomal protein L11 methyltransferase (PrmA) 83 157 - -
Psa1g1138 367 Gene3D Vaccinia Virus protein VP39 37 189 IPR029063 -
Psa1g1138 367 Gene3D - 192 367 - -
Psa1g1138 367 Coils Coil 366 367 - -
Psa1g1138 367 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 1.2-RELATED 36 367 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g1138 Psa-Chr1 77547701 77550380 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g1138 3 330 C2H2 Transcription Factor Family AT3G12270 36.857 1.97e-65 216
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g1138 K11434 - gmx:100781777 655.981