Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g1121 ATGGTGGAGAAGGGTGCAGGTGGTAGAAAAGAAGAGGTTGTTACCAGGGAGTACACAATCAACCTCCACAAGCGTCTCCATGGCTGCACCTTCAAGAAGAAGGCACCAAAAGCTATTAAAGAGATAAGGAAGTTTGCTCAAAAAGCCATGGGCACTAATGATGTTAGGGTTGATGTCAAGCTGAACAAGGCTATCTGGAGCCAAGGAATTAGAAGTGTACCAAGGAGGGTACGAGTACGCATTGCACGCAAGAGGAACGATGACGAAGATGCAAAGGAGGAATTATACTCCCTTGTCACCGTTGTTGAAATTCCCAAGGAAGAGCTAAAAGGTTTCATTTCCCTATAA 348 0.4511 MVEKGAGGRKEEVVTREYTINLHKRLHGCTFKKKAPKAIKEIRKFAQKAMGTNDVRVDVKLNKAIWSQGIRSVPRRVRVRIARKRNDDEDAKEELYSLVTVVEIPKEELKGFISL* 116
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g1121 115 Pfam Ribosomal protein L31e 12 93 IPR000054 GO:0003735|GO:0005840|GO:0006412
Psa1g1121 115 Gene3D - 2 113 IPR023621 -
Psa1g1121 115 PANTHER 60S RIBOSOMAL PROTEIN L31 4 112 IPR000054 GO:0003735|GO:0005840|GO:0006412
Psa1g1121 115 SMART Ribosomal_L31e_2 11 94 IPR000054 GO:0003735|GO:0005840|GO:0006412
Psa1g1121 115 PANTHER OS06G0319700 PROTEIN 4 112 - -
Psa1g1121 115 CDD Ribosomal_L31e 10 93 IPR000054 GO:0003735|GO:0005840|GO:0006412
Psa1g1121 115 SUPERFAMILY Ribosomal protein L31e 12 93 IPR023621 -
Psa1g1121 115 ProSitePatterns Ribosomal protein L31e signature. 55 69 IPR020052 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g1121 Psa-Chr1 76570089 76572481 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g1121 8 112 Cytoplasmic Ribosomal Protein Gene Family AT4G26230 82.857 4.05e-61 181
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g1121 K02910 - gmx:100306335 196.823
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa1g1121 1 76570089 76572481 Psa1g1121 1 76570089 76572481 ECH