Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g1116 ATGGCTAATTCATTTGGTTTCTTTCTGTTTCTGGTTTTGTTTTTTGCTGTTACAGTTTTAGTTCACGCACAACAACAAACAGGTTTCATAAGCATTGATTGTGGCAGTTCAGAGAATTTGTACACAGATGATGTAACAAAAATAAAATACAGTTCAGATGGATCATACATACAAACAGGAGTTAACAGAAACATTTCTATTGAATATGCATATCCAGCCAATCCAACTCTACCATTACCACTCTCGGATCTCAAAAGTTTTCCTCAAGGAGACCGAAACTGTTACCAATTAATCACCGGAAGAAAAGGAAGTTTATATTTAATAAGAGCTTCTTTCTTGTATGGAAACTACGACGGCGAAAACAAATTACCAGAATTTGATCTCTATGTTGGTGTAAATTTCTGGTCATCAGTGAAATTTAAGAATGCTTCAGAACAAGTTACATTGGAAATAATCAGCATGGCACAATCTGAAGAAATAAATGTTTGTCTTGTGAATAAAGGAAAGGGAATTCCGTTTATCTCAGGGTTGGAACTTAGACCGATTAGTAATTCTATTTACAACACTGAGTTTGGAGATTCTGCTTCACTTTTACTTTTCAAAAGATGGGATTTTGGTTCAACCAATGGAAGTGGTAGATATGAAGATGATGTTTATGATAGAATTTGGTTTCCTTTTACTTCCTCATCATGGAAATCTCTCAACAGTTCTGCAGTCGTTGATGTTAATGGAGATGGATATAAAGTACCATCTGAAGTTATAAGAACCTGTTCTACACCGAAGAATGAGAATGGTTCATTGGAATTTTCTTGGACTTCAAATGATCCTAATACGAAATTTTATGTCTACTTGTACTTTGCTGAAGTGGAGAGACTTCAGAGATCTCAACTGAGAAAATTCAGTGTTTCTTGGAATGGTTCTCCTTTGATTACATCAATAGTCCCAAAATACTGGCAAGCTACCTCTCTTTTTAATTCAAAGTCCTTGGTCGCAAAAGAACATCGAATTTCGATACAGAAAACCGAAGATTCGATGCTTCCACCTATTCTTAATGCGGTGGAGATTTATGTAGCTAGACAATTGGATGCACTTCCAACATTTGAAGAAGATGTTGAAGCTATAAAGAGTGTAAAAGAAAGTTATAGAGTTCAAAGAGATTGGGTTGGTGATCCATGTGAGCCAAAGAACTACACTTGGGAAGGCTTAAAGTGCAACTACAGCACTTCACTTCCTCCAAGAATTGTATCACTGAATCTAAGCAGAAGCAGTCTGAGTGGAATAATAACTCCTGCCATTTCCAATTTGACTTTCTTGGAATCTTTGGATTTATGTAACAATAGCTTAACCGGATCAATACCTCAGTTCTTGGAAGAATTGAGATCCCTTAAATATTTGAATTTAAGGGGCAACCAACTTTCAGGTTTTGTTTCTACCACTCTCCTAGAAAGATCAAAGAAGGGATTACTTACTTTGAGGGTGGATGATCAAAATCTCTCTGGTTCAAGTAAAAAGAAGAAGGTAATTGCTCCCGTTGTTGCATCAGTCACGTCAGTTTTAGTTCTACTAGTCATTGCCATTCTCTATTGGAAGCTTAGAAGAAGAAATGAACAATCAGAGGATGAGATGAATATGCTCAGCAAAAGTGTAGGAACTGTAGTATCAAAGAAGTTACAATACACATATGCTGAGGTGTTGTCCATTACCAGCAACTTTGAGTTGGTCATTGGGAGGGGGGGATTTGGAAGTGTTTATAGTGGTCAGATGAAAGATGGCAATAAAGTCGCAGTCAAGATGCTTTCCGCGACTTCAGCTCAGGGCCCGAAGGAATTTCAAACTGAGGCTGAACTTTTGATGACAGTTCATCACAAAAATTTAGTATCCTTCATTGGCTATTGTGATGAAGGTGACAAGATGGCACTCATATATGAGTACTTGGCTAATGGCAACCTAAAAGAAAATCTCTCAGAAAAAAGTTCACATTGCTTGAGTTGGGAAAGGAGAATTCAAATAGCAATCGATGCTGCAGAGGGATTGGATTATCTACACCATGGATGCAAGCCACCTATAATACACAGAGATGTAAAATCAGCTAACATTCTTCTAAGTGAAGACTTAGAAGCTAAGATAGCAGATTTTGGACTCTCTAAGGTGTTTAAGAATAGTGATAGTGGAAATTCAGAATCTGCAATTATTCATGTTGATGATAAAAATGAAAAATCTACAATCATGGGAACAATGGGCTACCTTGATCCAGAGTACTACAAATTAAGGAACTTGAATGAAAAAAGTGACATCTATAGTTATGGAATTGTACTATTGGAATTGATCACCGGTCTCCCTGCAGTGATTAAAGGAAAGCCATCAATTCACATACTTGAGTTTGTAAGACCACATCTTGGAAAATGTGATTTAAGCAAAATTATAGATCCAAGACTCCAAGGACAGTTTGATGAAGATTCAGTATGGAAAGTTTTGGGACTAGCAATTTCTTGCACTGCATCAACCTCATTTCATAGACCAACAATGAATGTTGTGTTATCTGAGCTTAAACAGTGTGTTAAAATGGAGTGTCCTAGTGATATGGAAATATTTGAGCCACCAAGACATATTTCCAGTGAATATTATAGTTCATCTGATGCTTTTAATTCCATGGAGGGTGAATCTATGACATACCCTTTCCCAAGGTAA 2688 0.3676 MANSFGFFLFLVLFFAVTVLVHAQQQTGFISIDCGSSENLYTDDVTKIKYSSDGSYIQTGVNRNISIEYAYPANPTLPLPLSDLKSFPQGDRNCYQLITGRKGSLYLIRASFLYGNYDGENKLPEFDLYVGVNFWSSVKFKNASEQVTLEIISMAQSEEINVCLVNKGKGIPFISGLELRPISNSIYNTEFGDSASLLLFKRWDFGSTNGSGRYEDDVYDRIWFPFTSSSWKSLNSSAVVDVNGDGYKVPSEVIRTCSTPKNENGSLEFSWTSNDPNTKFYVYLYFAEVERLQRSQLRKFSVSWNGSPLITSIVPKYWQATSLFNSKSLVAKEHRISIQKTEDSMLPPILNAVEIYVARQLDALPTFEEDVEAIKSVKESYRVQRDWVGDPCEPKNYTWEGLKCNYSTSLPPRIVSLNLSRSSLSGIITPAISNLTFLESLDLCNNSLTGSIPQFLEELRSLKYLNLRGNQLSGFVSTTLLERSKKGLLTLRVDDQNLSGSSKKKKVIAPVVASVTSVLVLLVIAILYWKLRRRNEQSEDEMNMLSKSVGTVVSKKLQYTYAEVLSITSNFELVIGRGGFGSVYSGQMKDGNKVAVKMLSATSAQGPKEFQTEAELLMTVHHKNLVSFIGYCDEGDKMALIYEYLANGNLKENLSEKSSHCLSWERRIQIAIDAAEGLDYLHHGCKPPIIHRDVKSANILLSEDLEAKIADFGLSKVFKNSDSGNSESAIIHVDDKNEKSTIMGTMGYLDPEYYKLRNLNEKSDIYSYGIVLLELITGLPAVIKGKPSIHILEFVRPHLGKCDLSKIIDPRLQGQFDEDSVWKVLGLAISCTASTSFHRPTMNVVLSELKQCVKMECPSDMEIFEPPRHISSEYYSSSDAFNSMEGESMTYPFPR* 896
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g1116 895 ProSitePatterns Protein kinases ATP-binding region signature. 575 597 IPR017441 GO:0005524
Psa1g1116 895 PANTHER BNAC07G41790D PROTEIN 7 857 - -
Psa1g1116 895 PANTHER OS07G0107800 PROTEIN-RELATED 7 857 - -
Psa1g1116 895 Gene3D Phosphorylase Kinase; domain 1 551 644 - -
Psa1g1116 895 SUPERFAMILY Protein kinase-like (PK-like) 554 849 IPR011009 -
Psa1g1116 895 SUPERFAMILY L domain-like 396 501 - -
Psa1g1116 895 CDD STKc_IRAK 575 851 - -
Psa1g1116 895 ProSiteProfiles Protein kinase domain profile. 569 864 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa1g1116 895 Gene3D Transferase(Phosphotransferase) domain 1 645 863 - -
Psa1g1116 895 SMART serkin_6 569 853 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa1g1116 895 Pfam Malectin-like domain 32 356 IPR024788 -
Psa1g1116 895 Gene3D Ribonuclease Inhibitor 359 517 IPR032675 -
Psa1g1116 895 ProSitePatterns Serine/Threonine protein kinases active-site signature. 689 701 IPR008271 GO:0004672|GO:0006468
Psa1g1116 895 Pfam Protein tyrosine and serine/threonine kinase 573 847 IPR001245 GO:0004672|GO:0006468
Psa1g1116 895 Pfam Leucine rich repeat 413 472 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g1116 Psa-Chr1 76427236 76434006 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g1116 9 878 Receptor kinase-like Gene Family AT4G29180 50.000 0.0 874
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Psa1g1116 Malectin_like 1.3e-105 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g1116 - - gmx:100793137 1251.5