Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Psa1g1085 | ATGACAATATTACCCACATCCCATATCAAAATTTCACTTTACTTTCATGTAGCCACCTTCTTTCTAATTTTGAGCCTTGCAAATTCTCAGTCTCAACAAGAACATTCAATCCTATTGAAGATAAAGCTTCACCTTCAAAATCCATCTTTTCTTACTCATTGGAACTCATCAAACACCTCCTATTGTTCTTGGCCAGAGATAACATGCACCACTGGTTCTGTCACAGGGTTGACTTTGGTCAACTCAAGCATAACTCAAACCATACCTTCTTTCATATGCGACCTTCAAAATCTCACACATGTTGATCTCAGCTACAATCTCATTCCTGGTGAGTTTCCAAAAGATCTATTCAAATGTTCCAATCTTGAGTATCTTGATTTGTCTTTTAACAACTTTGTTGGCAAGATTCCTTATGATATTCAAAGTCTGGTTCATTTGCAATATCTCAACCTTAGTTCAACCAATTTCGATGGCGAAATTCCTTCCAGTATTGGAAAGCTTAAGGATTTGAGATTCCTTGGCCTTAAATATTGCTCATTCAATGATACTTTTCCTTTTGAGGTAATTGGTGACTTGTTCAACCTTGAGTTCTTTGATTTGTCCTCCAATCCTTTGCTTCCTTTGAAGCTTCCATTAAGCTTAACCAAGTTGAAAAAATTGAAGTTTTTTATCATACATGCGTCAAATTTGGTAGGGGAAATTCCTGAAAATATTGGAGATATGGTTGCATTGGAGAAATTGGATTTATCAGAAAATAATTTAACAGGAAAAATTCCTAGTGGTTTGTTCATGCTGAAGAATTTGAGCATAGTGTACCTTAACAGCAATAATCTCTCGGGGGAGATACCGAGTTCGGTTGAAGCGTTGAATTTGACAACAATTGATCTTGCAAGAAATAGTCTCTCAGGGAAAATACCGAACGATTTTGGAAAGCTTCAAAAGTTATCAGTGTTGCATTTGCACATGAACAATTTTTCAGGAGAGATTCCAGAAAGCATAGCTCGTCTTGAATCTTTGACAGAGTTTAATGTTTTTATGAACAAGTTTTCAGGTACTCTTCCTATGGGTTTTGGCCTTTTTTCAAAGCTTGAATTTTTTCATATTGCGGTGAACAGTTTTAACGGAAAGTTACCGGAGAATTTGTGCTATCATGGTAAGCTACAAAATTTAACTGTTTATGAAAATAGTTTAAGTGGTGAGTTACCAAAATCACTTGGAAATTGTAGTAGTTTGGTTGAGCTGAAAGTTGACAAGAATCATTTTTCTGGTCAAATTCCTAATGGACTTTGGAGAGCTGAAAATTTGGTGAGTTTCATGATAAGTCATAATAAGTTCAATGGTGAGCTTCCTCAGAATTTGTCTTCAAGCATTTCACTTTTTGATATAAGTTATAATCAGTTTTATGGTGGAATTCCAATTGGAGTAGCTTCTTGGACTAATGTGGTTAAGTTCATAGCTAGCAAGAATAATCTTAATGGAAGTATTCCTCAAGAGCTAACAGCACTTCCTAATCTTGAAAGATTGTTGCTTGATCAAAATCAGCTTAAAGGGTCACTTCCAAATGATATAGTATCATGGAAATCATTAGTGATTCTAAATTTGAGCCAGAATCAACTTATTGGTGAAATTCCAAGTTCAATTGGTCATTTAGCTTCGCTTAGTGCTCTCGATCTATCAGAAAATCAATTCTCGGGTGAGATACCTTCTATACCTACTAGAATCACAGATCTCAATCTATCGTCGAATTACTTGACAGGAAAAGTTCCTAGTGATTTTGAAAATTCAGCTTTTGATAGAAGCTTTTTGAATAATTCTGGTTTATGTGCCGATACACCAAAACTTAGTCTTAGCCTTTGCGGATTCGGCCTTGAAAAATCAACCAAAACCTCACATTGGTCTATTGGTTTGATTATTAGCCTTATTGTTGTGACTTTCTTGTTGGCTTTGTTTGCATCATTCATGATTATCAAACTTTACAAGAAAAGAAATCACGAATCGGAAAGTTCATGGAAGCTCATTTCATTTCAAAGGCTAAGTTTCACAGAATTAGACATACTTTCCTCAATGACAGAACAAAATATCATCGGCAGCGGTGGATTCGGCACGGTATACCGTGTTCCTGTCAACGGTTTAACCTATGTGGCTGTCAAAAAAATCATGAGTAACAGAAAGTTAAGGCAAAAGCTCGAAACTTCATTTCATGCGGAAGTTAAAATATTGAGCAATATTCGTCATCGAAACATTGTGAAGTTGTTGTGTTGCATCTCTAATGAGGACTCCATGATGCTTGTGTATGAGTATTTGGAACACAGCAGCCTAGACAAATGGCTGCACAACAAGAATAAGTCAGGTTCCGCGCGACATGTTGTCCTTGATTGGCCGAAGCGATTGCAAATCGCCATTGGAATTGCTCATGGTTTGTGCTACATGCATCATGATTGCTCGCCTCCGATTGTTCATCGCGATATAAAAACAAGCAACATACTTTTGGATTCTCAATTCAACGCAAAAGTTGCCGATTTCGGTCTTGCTAGATCGTTGATGAAACCCGAAGAATTTAACACCATGTCAGCTGTTATTGGATCATTTGGTTATATGGCTCCAGAATACGTTCAAACAACTAAAATCAACGAAAAGATTGATGTGTTTAGCTTTGGTGTGATCCTATTGGAGCTAACAACCGGTAAAGAAGCTAACTATGGTGATGAGCATTCATCACTTGTAGAATGGTCATGGAGACATGTTCTTGTAGGAAGCAATATAGAAGATTTGTTGGACAAAGATTTTGTGGAACCAAGTTGTTTGGATGAAATGTGTTGCATTTTCAAACTTGGGATAATGTGTACTTCTACACTTCCTTCTAGTAGACCTTCCATGAAGGAAGTGTTGCACTTATTGGTTAGAAGTGAAAGAGGGTTTGTGTTTGGAGGTAGGAATGATGTTGGAGAATATGATGTTGTTCCTTTTCTTAAAAATTCTAAATTGAATAGTAGGAGGATTGATATTGTTGATAGTGATAGTGATAGTGACTAG | 3033 | 0.3653 | MTILPTSHIKISLYFHVATFFLILSLANSQSQQEHSILLKIKLHLQNPSFLTHWNSSNTSYCSWPEITCTTGSVTGLTLVNSSITQTIPSFICDLQNLTHVDLSYNLIPGEFPKDLFKCSNLEYLDLSFNNFVGKIPYDIQSLVHLQYLNLSSTNFDGEIPSSIGKLKDLRFLGLKYCSFNDTFPFEVIGDLFNLEFFDLSSNPLLPLKLPLSLTKLKKLKFFIIHASNLVGEIPENIGDMVALEKLDLSENNLTGKIPSGLFMLKNLSIVYLNSNNLSGEIPSSVEALNLTTIDLARNSLSGKIPNDFGKLQKLSVLHLHMNNFSGEIPESIARLESLTEFNVFMNKFSGTLPMGFGLFSKLEFFHIAVNSFNGKLPENLCYHGKLQNLTVYENSLSGELPKSLGNCSSLVELKVDKNHFSGQIPNGLWRAENLVSFMISHNKFNGELPQNLSSSISLFDISYNQFYGGIPIGVASWTNVVKFIASKNNLNGSIPQELTALPNLERLLLDQNQLKGSLPNDIVSWKSLVILNLSQNQLIGEIPSSIGHLASLSALDLSENQFSGEIPSIPTRITDLNLSSNYLTGKVPSDFENSAFDRSFLNNSGLCADTPKLSLSLCGFGLEKSTKTSHWSIGLIISLIVVTFLLALFASFMIIKLYKKRNHESESSWKLISFQRLSFTELDILSSMTEQNIIGSGGFGTVYRVPVNGLTYVAVKKIMSNRKLRQKLETSFHAEVKILSNIRHRNIVKLLCCISNEDSMMLVYEYLEHSSLDKWLHNKNKSGSARHVVLDWPKRLQIAIGIAHGLCYMHHDCSPPIVHRDIKTSNILLDSQFNAKVADFGLARSLMKPEEFNTMSAVIGSFGYMAPEYVQTTKINEKIDVFSFGVILLELTTGKEANYGDEHSSLVEWSWRHVLVGSNIEDLLDKDFVEPSCLDEMCCIFKLGIMCTSTLPSSRPSMKEVLHLLVRSERGFVFGGRNDVGEYDVVPFLKNSKLNSRRIDIVDSDSDSD* | 1011 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Psa1g1085 | 1010 | PANTHER | LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN | 15 | 998 | - | - | |
Psa1g1085 | 1010 | Pfam | Leucine Rich Repeat | 529 | 550 | IPR001611 | GO:0005515 | |
Psa1g1085 | 1010 | Pfam | Leucine Rich Repeat | 290 | 312 | IPR001611 | GO:0005515 | |
Psa1g1085 | 1010 | SUPERFAMILY | L domain-like | 244 | 570 | - | - | |
Psa1g1085 | 1010 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 818 | 830 | IPR008271 | GO:0004672|GO:0006468 | |
Psa1g1085 | 1010 | PANTHER | RECEPTOR KINASE-LIKE PROTEIN XA21 | 15 | 998 | - | - | |
Psa1g1085 | 1010 | SUPERFAMILY | L domain-like | 42 | 350 | - | - | |
Psa1g1085 | 1010 | SMART | LRR_typ_2 | 502 | 526 | IPR003591 | - | |
Psa1g1085 | 1010 | SMART | LRR_typ_2 | 550 | 577 | IPR003591 | - | |
Psa1g1085 | 1010 | SMART | LRR_typ_2 | 241 | 265 | IPR003591 | - | |
Psa1g1085 | 1010 | SMART | LRR_typ_2 | 312 | 336 | IPR003591 | - | |
Psa1g1085 | 1010 | SMART | LRR_typ_2 | 95 | 119 | IPR003591 | - | |
Psa1g1085 | 1010 | SMART | LRR_typ_2 | 143 | 167 | IPR003591 | - | |
Psa1g1085 | 1010 | Pfam | Leucine rich repeat | 75 | 132 | IPR001611 | GO:0005515 | |
Psa1g1085 | 1010 | Pfam | Leucine rich repeat N-terminal domain | 33 | 69 | IPR013210 | - | |
Psa1g1085 | 1010 | Gene3D | Ribonuclease Inhibitor | 190 | 474 | IPR032675 | - | |
Psa1g1085 | 1010 | Gene3D | Ribonuclease Inhibitor | 31 | 189 | IPR032675 | - | |
Psa1g1085 | 1010 | Gene3D | Ribonuclease Inhibitor | 475 | 616 | IPR032675 | - | |
Psa1g1085 | 1010 | Pfam | Protein kinase domain | 691 | 964 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Psa1g1085 | 1010 | ProSitePatterns | Protein kinases ATP-binding region signature. | 695 | 718 | IPR017441 | GO:0005524 | |
Psa1g1085 | 1010 | SMART | serkin_6 | 689 | 973 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Psa1g1085 | 1010 | Gene3D | Transferase(Phosphotransferase) domain 1 | 768 | 973 | - | - | |
Psa1g1085 | 1010 | ProSiteProfiles | Protein kinase domain profile. | 689 | 967 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Psa1g1085 | 1010 | Gene3D | Phosphorylase Kinase; domain 1 | 659 | 767 | - | - | |
Psa1g1085 | 1010 | PRINTS | Leucine-rich repeat signature | 244 | 257 | - | - | |
Psa1g1085 | 1010 | PRINTS | Leucine-rich repeat signature | 550 | 563 | - | - | |
Psa1g1085 | 1010 | SUPERFAMILY | Protein kinase-like (PK-like) | 678 | 966 | IPR011009 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Psa1g1085 | Psa-Chr1 | 74852094 | 74855642 | Proximal |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Psa1g1085 | 34 | 1008 | Receptor kinase-like Gene Family | AT5G25930 | 49.240 | 0.0 | 914 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-XI-1 | Psa1g1085 | Pkinase | 2.8e-49 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Psa1g1085 | - | - | cam:101515509 | 1508.43 |