Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g1080 ATGGTATGGCTAATTGCATTCGCATTGCTTCTTGGTGTTGTCATCGCTCTTCTTCTTTTCAACCCAAGACACCACAAATCTGGACAAAATGGAAAAGCTGTTTCCACCTCAAACAATGATAAGACATCAAAATCCTATAGTAAAAATGAAGTCACATTGCATAACACAAGAACAGATTGTTGGATAATCATCAAGAACAAGGTATACGATGTCACCTCATATGTGGAAGAACATCCTGGTGGTGATGCCATTCTAGCACATGCTGGAGATGATTCAACCGAAGGATTTTTCGGGCCACAGCACGCAACTCGAGTCTTTGACATGATTGAAGACTTCTACATTGGAGACTTGGACCAATAG 360 0.4083 MVWLIAFALLLGVVIALLLFNPRHHKSGQNGKAVSTSNNDKTSKSYSKNEVTLHNTRTDCWIIIKNKVYDVTSYVEEHPGGDAILAHAGDDSTEGFFGPQHATRVFDMIEDFYIGDLDQ* 120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g1080 119 PRINTS Cytochrome B5 signature 68 78 IPR001199 -
Psa1g1080 119 PRINTS Cytochrome B5 signature 78 92 IPR001199 -
Psa1g1080 119 PRINTS Cytochrome B5 signature 105 117 IPR001199 -
Psa1g1080 119 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 43 118 IPR001199 -
Psa1g1080 119 Pfam Cytochrome b5-like Heme/Steroid binding domain 48 117 IPR001199 -
Psa1g1080 119 MobiDBLite consensus disorder prediction 29 48 - -
Psa1g1080 119 PANTHER CYTOCHROME B5-LIKE PROTEIN 5 118 - -
Psa1g1080 119 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 41 118 IPR036400 -
Psa1g1080 119 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 74 81 IPR018506 GO:0020037
Psa1g1080 119 Gene3D - 36 119 IPR036400 -
Psa1g1080 119 PANTHER CYTOCHROME B5 5 118 - -
Psa1g1080 119 SMART Cyt_b5_2 46 118 IPR001199 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g1080 Psa-Chr1 74709324 74711758 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g1080 4 117 NADPH P450 reductases AT1G60660 61.345 8.59e-49 150
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g1080 - - gmx:100527821 192.2