Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g1038 ATGGCTTCTTCAATTCGTCCCTCGCTTTCTTCATTCAACAAGTTACCTTCTTTCTCTTCACGCAACCTTTCTCAGAGACTCTCTCTTTTTCATCTTCGCAATGGTGTTAGACAACTGCCTCATAACTTTGGTCTTAAAGCATCTAGGTTGTTGAGACATGAGAGTAGATGTATGAGATTGATGTCATCCGGGAGTATGTTTCCATCAGCTACGCAGGAAAATGCATTAGATTGGGTGAAGCAGGACAAGAGAAGAATGCTTCATGTCGTATATCGTGTTGGGGACTTGGACAAGAGCATAAAATTTTATACAGAGTGTCTAGGAATGAAGGTGCTCAGAAAACGTGACATGACGGAGGAGAGATATACTAATGCCTTTCTTGGATATGGGCCTGAGGATGCACACTTTGCTATTGAACTATCATACAATTATGGGATTGAAACGTATGACATTGGAACTGGATTTGGCCATTTTGGCGTTGCTTTGGATGATATTCCAAGAGTTGTGGACATTGTCAGAGCTAAGGGTGGCATAATAACTAGAGAGCCAGGTCCTATCAAGGGAGGCAACTCAACTGTTGCAGTGATTGAAGACCCTGATGGGTATAAACTTGAACTATTGGAAAGGGCTCCCTCTCCCGAACCCTTGTGCAAAGTAATGCTTCGGGTGGGTGATCTTGATCGATCCATAAAATTTTATGAGAAGGCTGTTGGTATGGAGCTGCTTCGAACACAAGATGATCCGGAATCCAGGCGTACCGTTGCAATAATGGGTTATGGTCCAGAAGAAAAAAACACTGTTCTGGAATTGACTTACAATTATGGTATCACAAAATATGATAAAGGGGATGCATATGCTCAGATTGCAATAGGCACAGATGATGTGTACAAAACTGCAGAAGCGATTAAACTCGCTGGAGGAAAGATAACCCGTGAAGCTGGACCGGTACCTGGTTACAGTACAAAAATTACATCATGTGTGGATCCCGATGGTTGGAAAACGGTTTTTGTAGATAATCAAGATTTTCATAAGGAGGTCGAGTAG 1044 0.4234 MASSIRPSLSSFNKLPSFSSRNLSQRLSLFHLRNGVRQLPHNFGLKASRLLRHESRCMRLMSSGSMFPSATQENALDWVKQDKRRMLHVVYRVGDLDKSIKFYTECLGMKVLRKRDMTEERYTNAFLGYGPEDAHFAIELSYNYGIETYDIGTGFGHFGVALDDIPRVVDIVRAKGGIITREPGPIKGGNSTVAVIEDPDGYKLELLERAPSPEPLCKVMLRVGDLDRSIKFYEKAVGMELLRTQDDPESRRTVAIMGYGPEEKNTVLELTYNYGITKYDKGDAYAQIAIGTDDVYKTAEAIKLAGGKITREAGPVPGYSTKITSCVDPDGWKTVFVDNQDFHKEVE* 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g1038 347 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 215 339 IPR037523 -
Psa1g1038 347 PANTHER LACTOYLGLUTATHIONE LYASE-LIKE PROTEIN 10 347 - -
Psa1g1038 347 PANTHER LACTOYLGLUTATHIONE LYASE 10 347 - -
Psa1g1038 347 Gene3D - 58 211 IPR029068 -
Psa1g1038 347 ProSitePatterns Glyoxalase I signature 2. 152 164 IPR018146 GO:0004462|GO:0046872
Psa1g1038 347 Gene3D - 212 347 IPR029068 -
Psa1g1038 347 CDD GlxI_Ni 86 207 - -
Psa1g1038 347 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 217 339 IPR029068 -
Psa1g1038 347 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 86 206 IPR004360 -
Psa1g1038 347 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 219 333 IPR004360 -
Psa1g1038 347 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 85 211 IPR029068 -
Psa1g1038 347 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 85 209 IPR037523 -
Psa1g1038 347 ProSitePatterns Glyoxalase I signature 1. 88 109 IPR018146 GO:0004462|GO:0046872
Psa1g1038 347 TIGRFAM glyox_I: lactoylglutathione lyase 216 344 IPR004361 GO:0004462|GO:0046872
Psa1g1038 347 TIGRFAM glyox_I: lactoylglutathione lyase 73 217 IPR004361 GO:0004462|GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g1038 Psa-Chr1 71626507 71630366 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g1038 218 336 Calmodulin-binding Proteins AT1G08110 25.517 3.09e-07 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g1038 K01759 - gmx:100802155 568.926
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa1g1038 1 71626507 71630366 Psa1g1038 1 71626507 71630366 ECH
Psa7g0354 7 23576559 23582048 Psa1g1038 1 71626507 71630366 PCT