LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Psa1g1001	ATGTATAAACCATTTGTGACATGTGATGATCCAAAAGGAGTTGTTGAGTGTGGAACTATAAGAAGATATAGGTCAAGTTCTCACAAAATGAAGGACAAGACAAAGGGCCGAAAGACGGCCGAAAATTTAGGGACAAACAAAGAAGCTAAAGAAGAGAAGGTATTGTCAAAAGGTTCGGGCGAAAGAGATTTTGATCCATCTTCTTTGCAGCTTGTGGAGGTGTCTAGAGGTGCCGAGAAATTGAACAAGATGATTAAGTCGTGGTCTAGTGGTTTAAGGTATGATGGAAAATCGGAAGATATTGCCAAGGATTTGTTAAAAGGAGCTCTTGATTTGCAAGAATCTCTAGAGATGCTTCGAAAGGTTCAAGATGCGTCGAGTAGTATTGCTCGTTCGAAGAAAAAACAAGACGAGGAACGTGAAAGGAGTAGAATTGATGCAAAGGTGAATGATAGAATTAGGACGACGCATTCTAATCAATTTGTTGAACACAATTCGGCTTATGGTTCTTCGAGTAGTTGTAGAGAGGAACTTAAGAAAGTTATTAAGGAGAGTTTGGTTAGACAAAATCTATTCCAAAGCACAAGCACTTCTGAAGGATTGGATTCGGTTTCCGCAGCGTTCCCTTCTACAAGCTCAAGTCAATCTTCTGTTGTTTGGTATGACAAACTTTCTGATTCTTCGTCGTCACCAAATTTTCCGAAGAAGGAGAAAAGCACCAATCTTGTTGCAAAGTTGATGGGATTAGAACAAGTCCCTTCAAGAACATTTCCATCTGTTATGCAAAAACAGATGGAGAATCAAAAGATTGTGAATCAAAAGAGACCGGTATTCGAGATTGATACACCGAAGGTAAGAAAGCATAGTTTGGTAGTCGAGAAGGTTAATCCAGATAGACAAAAAACACTGAGGGAAATTCTTGAAACCACTCATTTCAATGGATTGTTGAAGAATAGTCCTATTAGAGAGCACAAGCTTCACAATCATGTCAATCATTCCAATGATCTTCAATATGATGAGTTTGGTGATTTACCACCGATTGTGCTCATGAAACCCCGGCGTGCTTCGTATGAAGAATTCGTAGAAACTTATGAGCCGGTTCCTCAAGAAGAATCATCTTTTAGAAATCTAAAAGAAAGAGGAGTTCCTTCAAAAACCTTCAATCCAAGGGAAGGTTCAACTACCAACATGAGAAAAGACATGGAAGAAAATATTTCCAAAAGGCTTATCAGAGAGGAAAGGCCGAAGCGCGTCAAAGAGGTTTTTGAAATTGATGTGAAAGAAATCAAACCGGTTGAAAACAAGAAGGTTCAAAAAGCTAGTCAAAGATTACAAGCAAGTGAAACAGTTGATGAAAAAACTAAGGTAAAGAACATTACAAGTAGCAGAAAGCCACTAGAGAAGGAGGTTTCGAAAGCTAAAGTTGTAACAAAAGCTCAAGATCAAGGAGAAATCAGGTCTAGTAGTGAAAAGTTGAAGAAGCCGCGAAGTGTGTCGAGAATTGACAAGAACGATACTATATCTAGAAAGAGCACTTCTTCAAATTCAAATACCATAATCACAAAACCGAAGATACAAAAGGTTAATAGTTCGAAGGATTTGAAGAAGAGTCCGATGAAGAAGCAAAGATCTATCGACTTGCCGGAAGCAGCTAAACCACTAGATGAACAATTAACGCAAGAAGACGGAATGAATATCAATGTTTCTTGTAAAGATGATTGTGCTGAGATTAAAATAATCACTACAATAACCGAAGATCTCATCATGGAGCATGAAGTAGACACCTCTTTGAATAAGACTAGAGATATTTCTGAGGAGGTCCAGAATTCGTTAGGTGACGATGTTTTGATGATAAGTTGTGAACATGAAATCGATGCCATCCATGCCGAGGAACCTCATGACACCACCGGTATCAGTGGAACTGATTTCGAGCCAGACAAAGACACTCCTGAGCTGAAATATTTTCTTCTCACAAGTAAATCATTCATTGACCATGCAGTGGAGCTTCTCAATCTTGATGTTGGTTATCCTAAGATCCTACCAAAGATTGAAACAAAAGGAATAGCCAATAGCAGACTCTATTTGGACTGCGCGAACGAACTCGCCGAGAGAAAGAGCCTTCAAGAGTCATCATCACAAGTAGTTCACCCCTTATTGCTAACTTGTGTAGGGAATTCAAGATTGCAAATTTCTCTGGAAAGCTTGGTTGAAGAAGTTTACAAGGCAATTGAGAATCTGACATCTTATAGTGAAAATTCTGAGACTAAACTTATTTTGGATAATATCTGTGCAATGTTGGAGAGAGATATGAAGTGCAACAATAGAATGATAAATGGAATATGGAACTGTGGTTGGAAGCATGGATTTTCTTATGATGAAGTTGAACAAGTTGTTAATGAAGTAGAAAACATGGTTTTAGATGGATTAATTGAGGAGATTATTGTAAATTTATGA	2454	0.3818	MYKPFVTCDDPKGVVECGTIRRYRSSSHKMKDKTKGRKTAENLGTNKEAKEEKVLSKGSGERDFDPSSLQLVEVSRGAEKLNKMIKSWSSGLRYDGKSEDIAKDLLKGALDLQESLEMLRKVQDASSSIARSKKKQDEERERSRIDAKVNDRIRTTHSNQFVEHNSAYGSSSSCREELKKVIKESLVRQNLFQSTSTSEGLDSVSAAFPSTSSSQSSVVWYDKLSDSSSSPNFPKKEKSTNLVAKLMGLEQVPSRTFPSVMQKQMENQKIVNQKRPVFEIDTPKVRKHSLVVEKVNPDRQKTLREILETTHFNGLLKNSPIREHKLHNHVNHSNDLQYDEFGDLPPIVLMKPRRASYEEFVETYEPVPQEESSFRNLKERGVPSKTFNPREGSTTNMRKDMEENISKRLIREERPKRVKEVFEIDVKEIKPVENKKVQKASQRLQASETVDEKTKVKNITSSRKPLEKEVSKAKVVTKAQDQGEIRSSSEKLKKPRSVSRIDKNDTISRKSTSSNSNTIITKPKIQKVNSSKDLKKSPMKKQRSIDLPEAAKPLDEQLTQEDGMNINVSCKDDCAEIKIITTITEDLIMEHEVDTSLNKTRDISEEVQNSLGDDVLMISCEHEIDAIHAEEPHDTTGISGTDFEPDKDTPELKYFLLTSKSFIDHAVELLNLDVGYPKILPKIETKGIANSRLYLDCANELAERKSLQESSSQVVHPLLLTCVGNSRLQISLESLVEEVYKAIENLTSYSENSETKLILDNICAMLERDMKCNNRMINGIWNCGWKHGFSYDEVEQVVNEVENMVLDGLIEEIIVNL*	818

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Psa1g1001	817	MobiDBLite	consensus disorder prediction	34	60	-	-
	Psa1g1001	817	MobiDBLite	consensus disorder prediction	127	146	-	-
	Psa1g1001	817	Pfam	Domain of unknown function (DUF4378)	689	812	IPR025486	-
	Psa1g1001	817	PANTHER	OS01G0228800 PROTEIN	1	815	-	-
	Psa1g1001	817	MobiDBLite	consensus disorder prediction	528	544	-	-
	Psa1g1001	817	MobiDBLite	consensus disorder prediction	123	146	-	-
	Psa1g1001	817	MobiDBLite	consensus disorder prediction	25	67	-	-
	Psa1g1001	817	MobiDBLite	consensus disorder prediction	508	527	-	-
	Psa1g1001	817	MobiDBLite	consensus disorder prediction	447	475	-	-
	Psa1g1001	817	MobiDBLite	consensus disorder prediction	484	507	-	-
	Psa1g1001	817	MobiDBLite	consensus disorder prediction	447	544	-	-
	Psa1g1001	817	PANTHER	OS01G0228800 PROTEIN-RELATED	1	815	-	-

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Psa1g1001	644	814	TRM (TON1 Recruiting Motif) Superfamily	AT3G24630	31.461	2.57e-19	91.3

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Psa1g1001	-		-	gmx:100797863	922.154