Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g0995 ATGACAATCTTGGACATGGGACTTTTGTTGCTGGTGTTGTTGCCGGTATGGATTCCGAGTGCCTTGGTTTTGCACCAGATACAGAGATTTATGCATTTCGCGTGTTTACTGATGCACAGCCTATTGCAGGTGTCATATACCTCTTGGTTCCTTGACGCCTTTAACTATGCAATTGCAACCGATATGGATGTGCTCAATTTAAGTATAGGTGGACCTGATTACTTGGATCACCCATTTGTGGAAAAGATATGGGAGATAACAGCCAATAACATAATCATGGTCTCTGCAATTGGAAACGATGGACCACTTTATGGAACATTGAATAATCCAGCAGATCAAAGTGATGTGATTGGTGTTGGTGGTATTGACTATAGTGACCATATAGCCTCCTTTTCCTCACGTGGCATGAGTACATGGGAACTTCCTCACGGTTATGGCCGTGTGAAACCAGACATTGTTGCATATGGACGCGACATAATGGGATCAAAGATTAGTTCGGGCTGTAAAAGTTTATCCGGAACAAGTGTTGCAAGTCCTGTAGTTGCTGGTGTGGTATGTTTGCTTGTCAGTGTCATTCCTGAACCTGATCGCAAAAATATCTTAAACCCAGCAAGCATGAAACAAGCATTGGTCGAGGGTGCTGCAAAGCTTGCTGGGCCTAACATGTACGAACAGGGCGCTGGCAGAGTTGATCTGTTAGAATCATATGAGATTCTTAAGAGCTACAAACCTAGAGCAAGCATCTTTCCTAGTGTTCTTGATTACACGGATTGTCCTTATTCGTGGCCCTTTTGTCGTCAGCCACTCTATGCAGGTGCCATGCCTGTCATCTTCAATGCCAGCATTTTAAATGGAATGGGTGTTATTGGCTATGTCGAAAGTCCACCAATATGGCATCCTTTTAAAGAAGTAGGGAATCTTTTAAGCATTCATTTTACATATTCTGAGGTCATCTGGCCTTGGACTGGTTATTTGGCCATTCATATGCAAATCAAGGAAGAAGGTGCACAATTTTCTGGTAACATTGAAGGTAATGTAACTCTTAGGGTTTCCAGCCCTCCAGCTCTAGGAGAGAAGCACCCTCGAATAAGCACTTGCGTGCTTCAATTGAAGTTAAAAGTGGTGCCAAGACCGCCACGAGCAAAACGAATTTTGTGGGATCAGTTTCACAATATCAAATACCCCCCAGGTTATATTCCCAGAGATTCCTTGGATGTTCGTAATGACATTCTTGACTGGCATGGGGATCATCTACATACAAATTTTCACATAATGTTCAACATGTTACGAGATGCTGGTTACTATGTTGAAACACTCGGTTCTCCTCTTACGTGCTTTGATGCTCGACAATATGGAACACTTCTTTTGGTGGATCTTGAAGAAGAGTACTTTGCCGAGGAGATTGAAAAGTTGAGAGACGATGTTATGAATACTGGATTGGGACTAGCTGTCTTTGCTGAGTGGTACAATGTAGATACCATGGTAAAGATGAGATTCTTTGATGATAATACCCGGAGTTGGTGGACCCCTGTCACTGGAGGTGCTAATAATCCTGCACTTAATGATCTTTTGGCTCCATTTGGAATTGCCTTTGGAGATAAGATTCTGAGCGGTGATTTTTCACTTTTCGGGGAGGAGAATCGATACGCATCTGGAACAGACATAGTGAGGTTTCCAAGGGGTGGTTATGTACATAGCTTCCCTTTTTCGGATAGTTCAGAAAGTGGAGCCACTCAGAATGTGTTGCTTACTTCTAGCACTACCAAGGCCGATTCTCCAATTCTCGGTCTTACGGTGATGGGGGAAGGTCGCATTGGCGTGTATGGTGACTCCAACTGTTTAGACAGCAGCCATATGGTGACCAACTGTTTTACGCTTCTCAGGAAAATGCTAGATTTTACCAGCAATAATGTTAGAGATCCAGTGCTTTTCTCTAATTCAAATAAACAAGACGCTCCCTTGTATGAAGACGACAATCAGTTGCCATCTCGCAGAACAGATGTAAATTTTTCATCATATTCAGCTGTTGTGGGGAAGGAATTGTTCTGCAGGACCGACTCAAGGTTCGAAATATGGGGAACCAAGGGCTACAGTTTGCAAGTCAGAGGAAGAAACAGAAAATTGCCAGGTTATCCTGTCATTGATCTGGGTAGTGGTTTCAATTCAACCTTTGATGCTTCTTACCTTACTCGAAAGGTAAATTTAAGAAGTAAGGATGACTCTCTTGGGAATAGATATTTGGGCCTGTTCTATGGAGATGAGCCTGATGCGCCTATGCTGGTTCGTAGTCACTGGTTTATTCCTGCTGCTGTTGCAGTAACTGGTGTTTTACTATTGAGTTTTTGGCGCATTCGGCAAAAGAGACGTCGAAGAAGGAAAGGATCGTCAAGCACTGGTAGATTGACCAATTTATAG 2415 0.4302 MTILDMGLLLLVLLPVWIPSALVLHQIQRFMHFACLLMHSLLQVSYTSWFLDAFNYAIATDMDVLNLSIGGPDYLDHPFVEKIWEITANNIIMVSAIGNDGPLYGTLNNPADQSDVIGVGGIDYSDHIASFSSRGMSTWELPHGYGRVKPDIVAYGRDIMGSKISSGCKSLSGTSVASPVVAGVVCLLVSVIPEPDRKNILNPASMKQALVEGAAKLAGPNMYEQGAGRVDLLESYEILKSYKPRASIFPSVLDYTDCPYSWPFCRQPLYAGAMPVIFNASILNGMGVIGYVESPPIWHPFKEVGNLLSIHFTYSEVIWPWTGYLAIHMQIKEEGAQFSGNIEGNVTLRVSSPPALGEKHPRISTCVLQLKLKVVPRPPRAKRILWDQFHNIKYPPGYIPRDSLDVRNDILDWHGDHLHTNFHIMFNMLRDAGYYVETLGSPLTCFDARQYGTLLLVDLEEEYFAEEIEKLRDDVMNTGLGLAVFAEWYNVDTMVKMRFFDDNTRSWWTPVTGGANNPALNDLLAPFGIAFGDKILSGDFSLFGEENRYASGTDIVRFPRGGYVHSFPFSDSSESGATQNVLLTSSTTKADSPILGLTVMGEGRIGVYGDSNCLDSSHMVTNCFTLLRKMLDFTSNNVRDPVLFSNSNKQDAPLYEDDNQLPSRRTDVNFSSYSAVVGKELFCRTDSRFEIWGTKGYSLQVRGRNRKLPGYPVIDLGSGFNSTFDASYLTRKVNLRSKDDSLGNRYLGLFYGDEPDAPMLVRSHWFIPAAVAVTGVLLLSFWRIRQKRRRRRKGSSSTGRLTNL* 805
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g0995 804 ProSitePatterns Serine proteases, subtilase family, serine active site. 173 183 IPR023828 -
Psa1g0995 804 Gene3D Peptidase S8/S53 domain 36 246 IPR036852 GO:0004252|GO:0006508
Psa1g0995 804 SUPERFAMILY Subtilisin-like 44 232 IPR036852 GO:0004252|GO:0006508
Psa1g0995 804 ProSiteProfiles Serine proteases, subtilase domain profile. 1 239 - -
Psa1g0995 804 Pfam Subtilase family 46 220 IPR000209 GO:0006508|GO:0008236
Psa1g0995 804 PANTHER PEPTIDASE S8 42 527 - -
Psa1g0995 804 PANTHER PEPTIDASE S8 556 720 - -
Psa1g0995 804 PANTHER MEMBRANE-BOUND TRANSCRIPTION FACTOR SITE-1 PROTEASE 42 527 - -
Psa1g0995 804 PANTHER MEMBRANE-BOUND TRANSCRIPTION FACTOR SITE-1 PROTEASE 556 720 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g0995 1 782 Subtilisin-like Serine Gene Family AT5G19660 78.228 0.0 1256
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g0995 K08653 - gmx:100819188 1397.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa1g0995 1 68294547 68300749 Psa1g0995 1 68294547 68300749 ECH