Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g0987 ATGGTTGAAATGCTGCACCTTGCAATAGAACATTTTGAGGCCATGCAAGAACATTTTGGAGCTAAGACATTTTTGATATATGTAGAACCTGTGTTTAGCAAAACAGGAGAAACAATTGGAGTAAACTATATGGGAATGGAAATAACAGATCAGGTGAGAAAAAGAGAAAGAATGGCTAAGCTAAGGGAAGAAATTGCAGTTCAGAAAGCTAAGGAAACAGAACTTAATAAAACCATTCACATTACAGAGGAGACTATGAGAGCAAAACAAATGCTGGCAACAATGTCTCATGAGATAAGATCACCACTTTCTGGAGATTTGGTTCTTCAACTTATAAATGACATACTTGATCTTTCCAAAGTTGAGTCAGGAGCTATGAAAATGGAAGCTACCAAATTCAGGCCAAGAGAGGTAGTAAGGCATGTACTCCAGACAACTGCAGCATCATTGCAGAAAATGTTAACATTGGAAGGAGATATAGCATATGATATACCTATTGAGGTCACTGGAGATGTTTTAAGGATTCGGCAGATTCTCACAAATTTAGTCAGCAATGCTGTCAAGTTTACACATCAAGGCAAAGTTGGTATAAACCTTTATGTTGTTCCAGAACCACCATTTGCCAAATCAGAAGAATGCCACCAAACGGAGACAGAAGACCAGTCAACTGTTTCTTCAAATGGATTGAAGGAGAGGAAACATGCATCATCACTTTGTGATCGACCTATTGACTCAATATTCGTTTGA 747 0.3802 MVEMLHLAIEHFEAMQEHFGAKTFLIYVEPVFSKTGETIGVNYMGMEITDQVRKRERMAKLREEIAVQKAKETELNKTIHITEETMRAKQMLATMSHEIRSPLSGDLVLQLINDILDLSKVESGAMKMEATKFRPREVVRHVLQTTAASLQKMLTLEGDIAYDIPIEVTGDVLRIRQILTNLVSNAVKFTHQGKVGINLYVVPEPPFAKSEECHQTETEDQSTVSSNGLKERKHASSLCDRPIDSIFV* 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g0987 248 SUPERFAMILY Homodimeric domain of signal transducing histidine kinase 84 124 IPR036097 GO:0000155|GO:0007165
Psa1g0987 248 MobiDBLite consensus disorder prediction 212 236 - -
Psa1g0987 248 Gene3D - 103 233 IPR036890 -
Psa1g0987 248 PANTHER HISTIDINE KINASE CYTOKININ RECEPTOR 104 228 - -
Psa1g0987 248 PANTHER HISTIDINE KINASE CYTOKININ RECEPTOR 16 105 - -
Psa1g0987 248 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 113 200 IPR036890 -
Psa1g0987 248 Coils Coil 58 78 - -
Psa1g0987 248 CDD HisKA 89 120 IPR003661 GO:0000155|GO:0007165
Psa1g0987 248 PANTHER TWO-COMPONENT HISTIDINE PROTEIN KINASE 16 105 - -
Psa1g0987 248 PANTHER TWO-COMPONENT HISTIDINE PROTEIN KINASE 104 228 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g0987 Psa-Chr1 67767401 67768972 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g0987 19 231 Histidine Kinase Gene Family AT5G10720 66.942 2.89e-101 313
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g0987 - - cam:101512841 381.719