Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Psa1g0966 | ATGCCGCGATCAAGTTCGGGAGTTCATCACCAGCGTCAAAGCTCTGATAACTTCATCCTTGATGCAAATTATCAGGGAAGATGGTTTCATCCTTCAGCGTTTGCACATGAATTTGGAACTCGATCTTCGAGTTTGAGGAAGAGCGAGGATGATGGCGTGTTCATGAGTGGCTTGCTTGATTTGCATTCCTTTGATACTGAGCTTTTACCCGAGGGACAATATTTTGATGACTCTGAGCCGATTTTCCCCGGAAACAAACTTGCACCAAGATCTCGGGGCTTGACTGAGGGCAACATTCTTAGAAGTTTCTCAGCTGATAAAGAGAGAGCAAACAATGTTGCTAAGATCAAAGTTGCAGTCAGGAAGAGACCACTGAATAAGAAGGAAATAGCAAAGAAAGAAGAAGATATCATTACAATAAATTCAAATTCTCTCACAGTACACGAAAGAAAACTCAAGGTAGACTTGACAGAATACGTTGAGAAACACGGGTTCTTTTTTGATGCTGTGCTGGATGAAGATGTTTCAAATGATGAAGTGTATGCTGAGACTGTAGAGCCCATAGTTCCATTGATATTCCAACGAACAAAAGCAACTTGCTTTGCTTATGGCCAAACTGGGAGTGGGAAGACGTACACTATGCAACCATTGCCTCTCAAAGCATCCCAAGATATTTTAAGATTAATGCACCACACGTACCGGAGCCAAGGTTTCCAATTATACTTTAGTTTTTTCGAAATATATGGGGGGAAACTGTTTGATCTCCTCAATGATAGAAAAAAACTTTGCATGAGGGAGGATGGTAAGCAGCAGGTTTGCATTGTTGGCTTGCAGGAATACAGAGTATTTGAAGTTGAAACAATCAAGCAATTTATTGAGAAAGGAAATGCTTCAAGAAGTACTGGTACAACCGGTGCAAATGAGGAATCATCTCGATCGCATGCTATACTTCAACTTGTTATCAAGAGATCAGCTGATGGGTCTGAATCAAAGCCCGCTCGAGTCATAGGCAAACTATCTTTCATAGATCTGGCTGGAAGTGAACGCGGTGCAGATACCACGGATAATGATAAACAAACTAGGATTGAAGGGGCTGAAATTAATAAAAGCTTACTTGCACTGAAAGAATGCATTAGAGCCCTAGACAGTGACCAGGGGCATATCCCTTTCAGAGGAAGTAAATTGACTGAAGTTCTACGAGACTCTTTTGTTGGTGATTCAAGGACTGTAATGATATCTTGCATTTCTCCAAGCTCAGGTTCATGTGAGCATACTCTCAACACATTAAGATATGCTGACAGGGTAAAGAGCCTGTCAAAGGGGAACAGCTCCAGAAGGGACTCCCTTTCTTTATCCAACCTTAGAGACTCAACTGTATTGCCGATTTTACCTCATGATGATTCCTATGAAGATGAAATAACGTATGTTTCCGGTGAGAGGAATCAATTTGGTTGGTCCAAACAGCCTCAAAGAGAACCCTCGCCTCCAAATAAGGTGGACCGTGTTGCAAGTGGTAGGATAGAGGGAAATTTGGCACCATCTATGTACTCCGACCGACAAGGAGGTATTCAAAATGACAGAGCTGAGAAGGAAAATGATTACCTAGTACCAACATATGGACAAGACAGAACAAGAAAAGCGAGCAAGAGGGTAGATAACAACCAGTTGTCTACCATAGAAGACAAAAGGAAGATAGGCTCTCGTGCTAAACATGCAAATGTATCACATGTTGAGAATACATATTCTGATCCTGATGATGATTTTAATGCTCTGCTGAAGGATGAGGAAGAACTTGTAACTGCTCACCGCAAACAAGTGGAGGAAACAGTAGATATTGTTAGGGAGGAGATGAATTTACTCTTTGAAGCTGATCAACCAGGAACTCAATTGGATGCTTATATTTCCAAATTGAATACCATTTTGTCTCAAAAGGCTGCAGGAATATTTCAATTGCAGACTCAGTTGGCTCAATTCCAGAGACGTTTAAATGAGTACAACGTTTTCTCATCCTCGGGTGACTGA | 2022 | 0.4144 | MPRSSSGVHHQRQSSDNFILDANYQGRWFHPSAFAHEFGTRSSSLRKSEDDGVFMSGLLDLHSFDTELLPEGQYFDDSEPIFPGNKLAPRSRGLTEGNILRSFSADKERANNVAKIKVAVRKRPLNKKEIAKKEEDIITINSNSLTVHERKLKVDLTEYVEKHGFFFDAVLDEDVSNDEVYAETVEPIVPLIFQRTKATCFAYGQTGSGKTYTMQPLPLKASQDILRLMHHTYRSQGFQLYFSFFEIYGGKLFDLLNDRKKLCMREDGKQQVCIVGLQEYRVFEVETIKQFIEKGNASRSTGTTGANEESSRSHAILQLVIKRSADGSESKPARVIGKLSFIDLAGSERGADTTDNDKQTRIEGAEINKSLLALKECIRALDSDQGHIPFRGSKLTEVLRDSFVGDSRTVMISCISPSSGSCEHTLNTLRYADRVKSLSKGNSSRRDSLSLSNLRDSTVLPILPHDDSYEDEITYVSGERNQFGWSKQPQREPSPPNKVDRVASGRIEGNLAPSMYSDRQGGIQNDRAEKENDYLVPTYGQDRTRKASKRVDNNQLSTIEDKRKIGSRAKHANVSHVENTYSDPDDDFNALLKDEEELVTAHRKQVEETVDIVREEMNLLFEADQPGTQLDAYISKLNTILSQKAAGIFQLQTQLAQFQRRLNEYNVFSSSGD* | 674 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Psa1g0966 | 673 | PANTHER | KINESIN-RELATED PROTEIN 6 | 10 | 671 | - | - | |
Psa1g0966 | 673 | PRINTS | Kinesin heavy chain signature | 195 | 216 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
Psa1g0966 | 673 | PRINTS | Kinesin heavy chain signature | 304 | 321 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
Psa1g0966 | 673 | PRINTS | Kinesin heavy chain signature | 338 | 356 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
Psa1g0966 | 673 | PRINTS | Kinesin heavy chain signature | 388 | 409 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
Psa1g0966 | 673 | SMART | kinesin_4 | 113 | 444 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
Psa1g0966 | 673 | PANTHER | KINESIN-LIKE PROTEIN KIN-13B | 10 | 671 | - | - | |
Psa1g0966 | 673 | Pfam | Kinesin motor domain | 121 | 437 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
Psa1g0966 | 673 | ProSitePatterns | Kinesin motor domain signature. | 337 | 348 | IPR019821 | GO:0003777|GO:0005524|GO:0007018 | |
Psa1g0966 | 673 | MobiDBLite | consensus disorder prediction | 480 | 532 | - | - | |
Psa1g0966 | 673 | ProSiteProfiles | Kinesin motor domain profile. | 115 | 438 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
Psa1g0966 | 673 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 113 | 438 | IPR027417 | - | |
Psa1g0966 | 673 | CDD | KISc_KIF2_like | 115 | 436 | - | - | |
Psa1g0966 | 673 | Gene3D | Kinesin motor domain | 97 | 441 | IPR036961 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Psa1g0966 | Psa-Chr1 | 66419783 | 66427706 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Psa1g0966 | 114 | 438 | Calmodulin-binding Proteins | AT5G65930 | 35.821 | 2.17e-44 | 169 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Psa1g0966 | K10393 | - | gmx:100775562 | 1070.84 |