Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g0966 ATGCCGCGATCAAGTTCGGGAGTTCATCACCAGCGTCAAAGCTCTGATAACTTCATCCTTGATGCAAATTATCAGGGAAGATGGTTTCATCCTTCAGCGTTTGCACATGAATTTGGAACTCGATCTTCGAGTTTGAGGAAGAGCGAGGATGATGGCGTGTTCATGAGTGGCTTGCTTGATTTGCATTCCTTTGATACTGAGCTTTTACCCGAGGGACAATATTTTGATGACTCTGAGCCGATTTTCCCCGGAAACAAACTTGCACCAAGATCTCGGGGCTTGACTGAGGGCAACATTCTTAGAAGTTTCTCAGCTGATAAAGAGAGAGCAAACAATGTTGCTAAGATCAAAGTTGCAGTCAGGAAGAGACCACTGAATAAGAAGGAAATAGCAAAGAAAGAAGAAGATATCATTACAATAAATTCAAATTCTCTCACAGTACACGAAAGAAAACTCAAGGTAGACTTGACAGAATACGTTGAGAAACACGGGTTCTTTTTTGATGCTGTGCTGGATGAAGATGTTTCAAATGATGAAGTGTATGCTGAGACTGTAGAGCCCATAGTTCCATTGATATTCCAACGAACAAAAGCAACTTGCTTTGCTTATGGCCAAACTGGGAGTGGGAAGACGTACACTATGCAACCATTGCCTCTCAAAGCATCCCAAGATATTTTAAGATTAATGCACCACACGTACCGGAGCCAAGGTTTCCAATTATACTTTAGTTTTTTCGAAATATATGGGGGGAAACTGTTTGATCTCCTCAATGATAGAAAAAAACTTTGCATGAGGGAGGATGGTAAGCAGCAGGTTTGCATTGTTGGCTTGCAGGAATACAGAGTATTTGAAGTTGAAACAATCAAGCAATTTATTGAGAAAGGAAATGCTTCAAGAAGTACTGGTACAACCGGTGCAAATGAGGAATCATCTCGATCGCATGCTATACTTCAACTTGTTATCAAGAGATCAGCTGATGGGTCTGAATCAAAGCCCGCTCGAGTCATAGGCAAACTATCTTTCATAGATCTGGCTGGAAGTGAACGCGGTGCAGATACCACGGATAATGATAAACAAACTAGGATTGAAGGGGCTGAAATTAATAAAAGCTTACTTGCACTGAAAGAATGCATTAGAGCCCTAGACAGTGACCAGGGGCATATCCCTTTCAGAGGAAGTAAATTGACTGAAGTTCTACGAGACTCTTTTGTTGGTGATTCAAGGACTGTAATGATATCTTGCATTTCTCCAAGCTCAGGTTCATGTGAGCATACTCTCAACACATTAAGATATGCTGACAGGGTAAAGAGCCTGTCAAAGGGGAACAGCTCCAGAAGGGACTCCCTTTCTTTATCCAACCTTAGAGACTCAACTGTATTGCCGATTTTACCTCATGATGATTCCTATGAAGATGAAATAACGTATGTTTCCGGTGAGAGGAATCAATTTGGTTGGTCCAAACAGCCTCAAAGAGAACCCTCGCCTCCAAATAAGGTGGACCGTGTTGCAAGTGGTAGGATAGAGGGAAATTTGGCACCATCTATGTACTCCGACCGACAAGGAGGTATTCAAAATGACAGAGCTGAGAAGGAAAATGATTACCTAGTACCAACATATGGACAAGACAGAACAAGAAAAGCGAGCAAGAGGGTAGATAACAACCAGTTGTCTACCATAGAAGACAAAAGGAAGATAGGCTCTCGTGCTAAACATGCAAATGTATCACATGTTGAGAATACATATTCTGATCCTGATGATGATTTTAATGCTCTGCTGAAGGATGAGGAAGAACTTGTAACTGCTCACCGCAAACAAGTGGAGGAAACAGTAGATATTGTTAGGGAGGAGATGAATTTACTCTTTGAAGCTGATCAACCAGGAACTCAATTGGATGCTTATATTTCCAAATTGAATACCATTTTGTCTCAAAAGGCTGCAGGAATATTTCAATTGCAGACTCAGTTGGCTCAATTCCAGAGACGTTTAAATGAGTACAACGTTTTCTCATCCTCGGGTGACTGA 2022 0.4144 MPRSSSGVHHQRQSSDNFILDANYQGRWFHPSAFAHEFGTRSSSLRKSEDDGVFMSGLLDLHSFDTELLPEGQYFDDSEPIFPGNKLAPRSRGLTEGNILRSFSADKERANNVAKIKVAVRKRPLNKKEIAKKEEDIITINSNSLTVHERKLKVDLTEYVEKHGFFFDAVLDEDVSNDEVYAETVEPIVPLIFQRTKATCFAYGQTGSGKTYTMQPLPLKASQDILRLMHHTYRSQGFQLYFSFFEIYGGKLFDLLNDRKKLCMREDGKQQVCIVGLQEYRVFEVETIKQFIEKGNASRSTGTTGANEESSRSHAILQLVIKRSADGSESKPARVIGKLSFIDLAGSERGADTTDNDKQTRIEGAEINKSLLALKECIRALDSDQGHIPFRGSKLTEVLRDSFVGDSRTVMISCISPSSGSCEHTLNTLRYADRVKSLSKGNSSRRDSLSLSNLRDSTVLPILPHDDSYEDEITYVSGERNQFGWSKQPQREPSPPNKVDRVASGRIEGNLAPSMYSDRQGGIQNDRAEKENDYLVPTYGQDRTRKASKRVDNNQLSTIEDKRKIGSRAKHANVSHVENTYSDPDDDFNALLKDEEELVTAHRKQVEETVDIVREEMNLLFEADQPGTQLDAYISKLNTILSQKAAGIFQLQTQLAQFQRRLNEYNVFSSSGD* 674
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Psa1g0966 673 PANTHER KINESIN-RELATED PROTEIN 6 10 671 - -
Psa1g0966 673 PRINTS Kinesin heavy chain signature 195 216 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Psa1g0966 673 PRINTS Kinesin heavy chain signature 304 321 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Psa1g0966 673 PRINTS Kinesin heavy chain signature 338 356 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Psa1g0966 673 PRINTS Kinesin heavy chain signature 388 409 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Psa1g0966 673 SMART kinesin_4 113 444 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Psa1g0966 673 PANTHER KINESIN-LIKE PROTEIN KIN-13B 10 671 - -
Psa1g0966 673 Pfam Kinesin motor domain 121 437 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Psa1g0966 673 ProSitePatterns Kinesin motor domain signature. 337 348 IPR019821 GO:0003777|GO:0005524|GO:0007018
Psa1g0966 673 MobiDBLite consensus disorder prediction 480 532 - -
Psa1g0966 673 ProSiteProfiles Kinesin motor domain profile. 115 438 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Psa1g0966 673 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 113 438 IPR027417 -
Psa1g0966 673 CDD KISc_KIF2_like 115 436 - -
Psa1g0966 673 Gene3D Kinesin motor domain 97 441 IPR036961 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Psa1g0966 Psa-Chr1 66419783 66427706 Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g0966 114 438 Calmodulin-binding Proteins AT5G65930 35.821 2.17e-44 169
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g0966 K10393 - gmx:100775562 1070.84
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa1g0966 1 66419783 66427706 Psa1g0966 1 66419783 66427706 ECH