Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g0937 ATGAAAAATATTCCAACTATAAAGTTTAAAAAACTTTTCATCAATGGAGAATTTGTGGACTCAGTTTCAGGAAAAACTTTTGAAACTGTTGATCCAAGAACAGAAGAAGTAATTACAGAAATTGCTGAAGCAACCAAAGAAGATGTTGATATTGCTGTCAAAGCTGCACGCCAGGCGTTCGATAATGGTCCGTGGCCACGCATGCCTGGTGCTGAAAGAGCAAAGATTATGGTGAAATGGGCGACATTGATTGAACGAAACATAGAAGAAGTTGCAGCGTTGGATACGATTGATGGAGGGAAGTTGTATAGTTGGTGTAAAACTGTTGATATACCGGAAGCGGCTAATATCTTGCGTTACTATGCTGGTGCTGCGGATAAGATTCATGGAGAAGTGTTTAAAACTTCTAGGAATCTTCATTTGTATACTTTGATGGAACCTATTGGTGTTGTTGGGCATATTATACCTTGGAATTTTCCGACTATTATGTTTTTTACTAAGGTTGCTCCTTCTTTGGCTGCTGGTTGTACTATGGTTCTTAAACCTGCTGAACAAACACCTCTTTCGGCTTTGTTTTATGCTCATCTTGCTAAACAGGCTGGAATTCCGGATGGAGTACTCAACGTAGTACCTGGATTTGGTTCAAATGCTGGAGCTGCAATAACCTCACATATGGACATTGATGCAGTCAGTTTTACTGGTTCAACCGAAACAGGTCGTCGCGTAATGCAGGCGGCTGCATTGAGCAATTTGAAGCCGGTATCGCTTGAGTTAGGAGGCAAGTCACCTATCATAGTTTTTGATGATGCTGATGTTGATAAAGCTGTTGATCTTGCTCTATTTGGAATCCTTCATAATAAGGGTGAAGTATGTGTTGCATTTTCAAGAGTTTTTGTTCAAGAAGGAGTTTATGATGAATTTGAGAAGAAAGTGGTGGAAAAGGTGATAAATTGGGTAGTTGGTGACCCTTTTGATCCTAAAGTTCAACAAGGACCCCAAACTAGTAAGGTACAGTTTGATAAAATTCTTTCCTATATTGAACATGGAAAGAATGAAGGAGCCACACTATTATATGGGGGTAGGAAAGTGGGAAAGAAAGGATACTACATTGAGCCTACTATTTTTACCAATGTTAAGGACGATATGCTAATAGCACAAGATGAAATATTTGGACCTGTTATGACACTTTCTAAGTTCAAGACCATTGATGAAGCAATTAAGAAGGCCAACAATACTAAATATGGCCTAGCAGCAGGGATTGTGACCCAAAACTTGGACATTGCCAATACTGTCACAAGGTCAATTCGGGCGGGCATCATTTGGATCAATTGCTACTTTGCCTTTGATAATGACTGCCCTTTTGGAGGGTATAAGATGAGTGGATTTGGAAGAGATTATGGATTGGAAGCACTTCACAAATATCTTCAAGTTAAATCTGTTGCAACTCCTATTTACAATTCTCCATGGCTTTGA 1473 0.3938 MKNIPTIKFKKLFINGEFVDSVSGKTFETVDPRTEEVITEIAEATKEDVDIAVKAARQAFDNGPWPRMPGAERAKIMVKWATLIERNIEEVAALDTIDGGKLYSWCKTVDIPEAANILRYYAGAADKIHGEVFKTSRNLHLYTLMEPIGVVGHIIPWNFPTIMFFTKVAPSLAAGCTMVLKPAEQTPLSALFYAHLAKQAGIPDGVLNVVPGFGSNAGAAITSHMDIDAVSFTGSTETGRRVMQAAALSNLKPVSLELGGKSPIIVFDDADVDKAVDLALFGILHNKGEVCVAFSRVFVQEGVYDEFEKKVVEKVINWVVGDPFDPKVQQGPQTSKVQFDKILSYIEHGKNEGATLLYGGRKVGKKGYYIEPTIFTNVKDDMLIAQDEIFGPVMTLSKFKTIDEAIKKANNTKYGLAAGIVTQNLDIANTVTRSIRAGIIWINCYFAFDNDCPFGGYKMSGFGRDYGLEALHKYLQVKSVATPIYNSPWL* 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g0937 490 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 260 449 IPR016163 GO:0016620
Psa1g0937 490 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 256 263 IPR029510 GO:0016491
Psa1g0937 490 SUPERFAMILY ALDH-like 6 486 IPR016161 GO:0016491
Psa1g0937 490 Pfam Aldehyde dehydrogenase family 18 480 IPR015590 GO:0016491
Psa1g0937 490 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 3 490 - -
Psa1g0937 490 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 284 295 IPR016160 GO:0016491
Psa1g0937 490 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 14 478 IPR016162 GO:0016491
Psa1g0937 490 PANTHER CYTOSOLIC ALDEHYDE DEHYDROGENASE 3 490 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g0937 Psa-Chr1 63671691 63674427 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g0937 4 490 Aldehyde Dehydrogenase Gene Family AT3G24503 69.877 0.0 726
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g0937 K12355 - gmx:100784449 868.611
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g0313 7 21663268 21669978 Psa1g0937 1 63671691 63674427 PCT