Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g0929 ATGACGAAACTTGAAGAAGAGATTCATAATAATGGGGTGAACTTATCAACCCAAAGAAGCTTTGGAACAAAACTGAAATCTGGATTGAAAGAAACTTTTTTTCCAGATGATCCGTTTAGACAGATTATGGAAGAGGAAAAACCGTCTCGTAGGTTGATTAAAGGGGTGCAGTATTTTGTACCAATCTTTGAGTGGTTGCCAAATTATAATCTGAGGTTGTTTTTCTCAGACTTGATTGCTGGTCTCACCATTGCTAGTCTGGCCATTCCTCAAGGCATTAGTTATGCCAAACTCGCAAATCTTCCTCCTCTTGTCGGCCTTTATTCAAGCTTTGTTCCACCATTAGTGTATGCTGTCTTTGGGAGTTCAAGGCACATGGCAGTTGGAACAATAGCAGCTGCATCATTGCTAATTGGTGACACAATATCAACGGTAGCTGACCATGAAAAAGAACCAGCATTGTATCTTCATTTGATTTTTACAACAACTTTTGTCACTGGGGTTTTTCAGGCCTGTTTGGGTTTTTTCAGGCTTGGAATATTAGTTGATTTCTTTTCTCATTCTACCATTACTGGCTTCATGGGAGGTACTGCAGTGATTCTCATCCTTCAACAACTAAAGGGTATTTTGGGATTGAAACATTTTTCAACCAAAACCAATGTTGTATCAGTCATAGAGGCCATCTTCACCAATAGACACGAGATAAGATGGGAAACAACACTTCTTGGAATAATCTTCCTTATTTTCTTGCAATATACAAGGCACTTGAGGGTTAAAAAACCAAAACTCTTTTGGGTATCTGCTATAGCTCCAATGACAACTGTAGTACTTGGTGGCATTTTTACATACCTTGTCAAAGGTCAAAAACATGGAATTCAAATAGTGGGGCATTTAGATAAAGGATTAAACCCTTGGTCAATTCAATATTTGAATTTTGACAGTAGATATTTACCAGCGGTGTTAAGAGCTGGTTTAATCACTGGAGTTTTGTCATTAGCGGAAGGAATAGCCATAGGAAGAAGCTTTTCTGTTACTGATAATACACCTCATGATGGAAACAAAGAGATGATAGCTTTTGGACTTATGAATTTATTTGGTTCTTTTACATCATGTTACTTAACTAGTGGACCATTTTCCAAGACTGCCGTGAATTATAATGCAGGGTGTAAAAGTGCAATGACAAATGTGGTACAAGCAGTTTTAATGGCTCTTACACTACAATTTTTGGCACCATTATTTGGCAACACACCACTTGTTGCTCTATCTGCTATTATTGTGTCTGCAATGTTGGGGCTCATAAATTATGAGGAAGCTATTTACCTCTTTAAAGTTGATAAATTTGATTTTGTTATTTGCATGAGTGCATTCTTAGGTGTTGCCTTCATAAGCATGGACATGGGCCTTATGATCTCCGTTGGACTAGGTTTGATTAGAGGACTAATTTATTTGGCTAGACCTGCATCATGCAAACTTGGAAAATTATCTGATTCTGGTATATACAGAGATGTTGAACAATATTCTAATGCTTCAAGAGTTCCTGGAGTTTTAGCTTTACAAATTGGTTCTCCTGTTTATTTTTCAAATTCTACTTACATCAAAGAAAGGATTTTGAGATATGTTAAAAGCGAACAATACTCTTCTGGAGATGATATCGAACATGTTATACTCGATTTTACAGGAGTAACTTCCATTGACACAACTGGTATTGAAGGATTGTTGGAGACAAATAAAGTGTTGGAAAGAAAAGGAATTCAGGTATCATTTGCATCTCATGTCTTTGTAGTTGATTTTCACTATTAG 1800 0.3678 MTKLEEEIHNNGVNLSTQRSFGTKLKSGLKETFFPDDPFRQIMEEEKPSRRLIKGVQYFVPIFEWLPNYNLRLFFSDLIAGLTIASLAIPQGISYAKLANLPPLVGLYSSFVPPLVYAVFGSSRHMAVGTIAAASLLIGDTISTVADHEKEPALYLHLIFTTTFVTGVFQACLGFFRLGILVDFFSHSTITGFMGGTAVILILQQLKGILGLKHFSTKTNVVSVIEAIFTNRHEIRWETTLLGIIFLIFLQYTRHLRVKKPKLFWVSAIAPMTTVVLGGIFTYLVKGQKHGIQIVGHLDKGLNPWSIQYLNFDSRYLPAVLRAGLITGVLSLAEGIAIGRSFSVTDNTPHDGNKEMIAFGLMNLFGSFTSCYLTSGPFSKTAVNYNAGCKSAMTNVVQAVLMALTLQFLAPLFGNTPLVALSAIIVSAMLGLINYEEAIYLFKVDKFDFVICMSAFLGVAFISMDMGLMISVGLGLIRGLIYLARPASCKLGKLSDSGIYRDVEQYSNASRVPGVLALQIGSPVYFSNSTYIKERILRYVKSEQYSSGDDIEHVILDFTGVTSIDTTGIEGLLETNKVLERKGIQVSFASHVFVVDFHY* 600
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g0929 599 Gene3D STAS domain 486 593 IPR036513 -
Psa1g0929 599 Pfam Sulfate permease family 74 454 IPR011547 GO:0016021
Psa1g0929 599 TIGRFAM sulP: sulfate permease 61 590 IPR001902 GO:0015301|GO:0016020|GO:0055085
Psa1g0929 599 ProSiteProfiles STAS domain profile. 505 590 IPR002645 -
Psa1g0929 599 PANTHER SULFATE TRANSPORTER 3.5-RELATED 8 589 IPR030316 GO:1902358
Psa1g0929 599 PANTHER SULFATE TRANSPORTER 8 589 IPR001902 GO:0015301|GO:0016020|GO:0055085
Psa1g0929 599 ProSitePatterns SLC26A transporters signature. 103 124 IPR018045 GO:0008271|GO:0008272
Psa1g0929 599 SUPERFAMILY SpoIIaa-like 510 590 IPR036513 -
Psa1g0929 599 CDD STAS_SulP_like_sulfate_transporter 506 589 - -
Psa1g0929 599 Pfam STAS domain 506 590 IPR002645 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g0929 Psa-Chr1 62872159 62876625 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g0929 11 586 Inorganic Solute Cotransporters AT5G19600 62.153 0.0 739
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g0929 K17471 - gmx:100789107 857.825
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa1g0929 1 62872159 62876625 Psa1g0929 1 62872159 62876625 ECH