Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g0911 ATGACTGTAAAGAAACAGGACTCGAAAAAAGTTTCTGGCCTCGGCAATCAATCTTCAAGGAAGCTACATCGCAAAGGAGAGAACCCTATTCGATTCGTACCAGCTGCTGACCCTCCTCCTCCTGATAACGGACATTCAAACTCGTGGATCTGTAAAAACTCCGCTTGCAGGGCAGTTTTATCCAAAGAGGACACGTTCTGTAGAAGGTGCTCTTGCTGTATTTGCCATCTTTTCGATGATAACAAAGATCCTAGTCTTTGGTTGGTATGCAGCGAATCTTCTCAAGGGGACTCGTGTGGATTGTCTTGCCATATCGAGTGTGCTCTTCAACATGAAAAAGTCGGAGTTGTTGATCATGGACAACTTATGCAACTTGACGGTGGTTATTGTTGTGCCTCCTGTGGTAAAGTTACCGGGATACTCGGATGTTGGAAGAAGCAGCTAAACATAGCGAAAGATGCTCGGCGTGTGGACATACTATGTTACAGGATATATTTGAGCTACAGGCTTCTGAATGGTACTGTGAAATTTAAAGAATTGCATGACATGGTACAAGAGGCAAAGGCTAAACTGGAAAAGGAAGTTGGTCCAGTTAACGGCGTTTCTTCCAAGATGGCACGTGGCATTGTCAGCAGACTTCCTATTGCCAGTGACGTGCAGAAACTTTGTTCTCTTGCTATCGAGAAAGCTAACGAGTGGTTGGCTACCGATGACAATCCCGAATCCAAAGAGGGTTCGCTTCCTGCTGCATGTAAGTTTGTGTTTGAAGAGATAACAGCTTCCTCAGTCAAGATCATTTTACTTGAAATGTCGAATGTAACTTCCGAAGACATTAAGGGGTTCAAGCTCTGGTATTACAAGAGTAGGGTGGAATCACACACACAAGAACCTGTTTGTGTGTTTCCAAAAGCTCAGAGGAGGATTTTGATATCTAACCTCCAGCCTTGCACAGAATATACTTTTCGGATCGTGTCTTATACAGATATCAGTGACCTTGGTCATTCGGAGGCTAAGTGTTTCACCAAAAGCATTGAGATATTGGAAAAGATTCCGACTCCATCAATTGACATGAATACTAAAAAGGAGAATACTCAATCTGGAGAAGGCAATGAATCGGGATCCAAAATAGAGCCTGATTCTACGATGGCAGACTCTGGATTCAAGGTTCGAGACCTTGGAAAGATTTTGCACCTTGCATGGGCTCAAGAACAAGGTTGCATTGAGGGGTTTTGTCGTTCAGATACGAAAAACTGCTGTGGTCAAAATGAAACGGTCAAGCCTAGCAACCCGGTAGAGCAGTCAGCGCCACCTTTGGTTTCTCGAGACCTTGATCTCAATGTTAGCTCTGTGCCTGACTTAAATGAAGAACTCACTCCTCCTTTCGAGTCTTCTCGTGATGAGGACAACTGTTGCACTTTGCAGCAGGCTGTTGAGGCAGATGATGACGCTGCTTCTCACGATTTAGAGAAGAACCTAGCAAGACCACATGGTAGCGGTGGCTCTGAAACATGGAACCATAAACCAGCCGGAGAAGTTCCGGCCGTTGACTCGCGCGTAGTCTTAGAAGCAAGTAGGAAAAGGGTAGCAAGCACAAATGAAGAAACACATGACTGTGACAGCACCTTAATAAACAGTTCTCCTTTACACTTACCCGACGGATCATTCTCCTTAGACGAGAACTTCGAGTATTGTGTTAAAGTAATTCGTTGGCTCGAATGTCAGGGTCATATCAAGCAAGAGTTTAGGCTGAAATTGCTCACATGGTTTAGTTTGAGGTCGACAGAACAAGAACGTAGGGTGGTTAATACTTTCATTCAGACACTGATCGATGATCCTAGTAGTTTGGCAGGTCAACTAGTCGACTCGTTTTCTGACATTATATCCAACAAGAGGCCCAGAAATGGATTCAGTAACAAGATTGTGTCATTAAATTAA 1935 0.4403 MTVKKQDSKKVSGLGNQSSRKLHRKGENPIRFVPAADPPPPDNGHSNSWICKNSACRAVLSKEDTFCRRCSCCICHLFDDNKDPSLWLVCSESSQGDSCGLSCHIECALQHEKVGVVDHGQLMQLDGGYCCASCGKVTGILGCWKKQLNIAKDARRVDILCYRIYLSYRLLNGTVKFKELHDMVQEAKAKLEKEVGPVNGVSSKMARGIVSRLPIASDVQKLCSLAIEKANEWLATDDNPESKEGSLPAACKFVFEEITASSVKIILLEMSNVTSEDIKGFKLWYYKSRVESHTQEPVCVFPKAQRRILISNLQPCTEYTFRIVSYTDISDLGHSEAKCFTKSIEILEKIPTPSIDMNTKKENTQSGEGNESGSKIEPDSTMADSGFKVRDLGKILHLAWAQEQGCIEGFCRSDTKNCCGQNETVKPSNPVEQSAPPLVSRDLDLNVSSVPDLNEELTPPFESSRDEDNCCTLQQAVEADDDAASHDLEKNLARPHGSGGSETWNHKPAGEVPAVDSRVVLEASRKRVASTNEETHDCDSTLINSSPLHLPDGSFSLDENFEYCVKVIRWLECQGHIKQEFRLKLLTWFSLRSTEQERRVVNTFIQTLIDDPSSLAGQLVDSFSDIISNKRPRNGFSNKIVSLN* 645
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g0911 644 MobiDBLite consensus disorder prediction 1 19 - -
Psa1g0911 644 PANTHER VIN3-LIKE PROTEIN 2-RELATED 2 640 IPR044514 GO:0010048|GO:0040029
Psa1g0911 644 MobiDBLite consensus disorder prediction 1 41 - -
Psa1g0911 644 Gene3D Immunoglobulins 236 337 IPR013783 -
Psa1g0911 644 MobiDBLite consensus disorder prediction 358 382 - -
Psa1g0911 644 SUPERFAMILY Fibronectin type III 254 330 IPR036116 GO:0005515
Psa1g0911 644 ProSiteProfiles Fibronectin type-III domain profile. 247 346 IPR003961 GO:0005515
Psa1g0911 644 PANTHER VIN3-LIKE PROTEIN 1 2 640 - -
Psa1g0911 644 MobiDBLite consensus disorder prediction 358 379 - -
Psa1g0911 644 Pfam PHD - plant homeodomain finger protein 51 168 IPR032881 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g0911 Psa-Chr1 61177723 61183117 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g0911 47 635 PHD Gene Family AT3G24440 48.344 0.0 527
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g0911 - - gsj:114418583 1108.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa1g0911 1 61177723 61183117 Psa1g0911 1 61177723 61183117 ECH