Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g0850 ATGTTTACATCAAGGAAGAAAATCAGCAAGGACAAGGGTGCTGAACCTACTGAATTTGAGGAATCAGTTGGACAGGCATTGTTTGATCTTGAAAACACCAACCATGAGTTGAAGAGCGAGTTGAAAGATTTATACATAAACTCTGCAGTCCAAGTTGATGTTTCTGGCAACCGCAAGGCTGTTGTTATCCATGTCCCATACAGATTGAGGAAGGGTTTCCGCAAAATTCATGTCAGGCTTGTTAGGGAGCTTGAGAAGAAATTTAGCGGCAAGGATGTAATCCTGATTGCCACCAGGAGAATTGTAAGACCCCCAAAGAAGGGTTCAGCTGCTCAGCGCCCCCGCAGCCGAACACTCACTGCTGTGCATGAGGCAATGCTGGAGGATGTTGTCATTGCCTGCTGA 405 0.4617 MFTSRKKISKDKGAEPTEFEESVGQALFDLENTNHELKSELKDLYINSAVQVDVSGNRKAVVIHVPYRLRKGFRKIHVRLVRELEKKFSGKDVILIATRRIVRPPKKGSAAQRPRSRTLTAVHEAMLEDVVIAC* 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g0850 134 PANTHER 40S RIBOSOMAL PROTEIN S7 2 132 IPR000554 GO:0003735|GO:0005840|GO:0006412
Psa1g0850 134 Coils Coil 27 47 - -
Psa1g0850 134 Pfam Ribosomal protein S7e 7 132 IPR000554 GO:0003735|GO:0005840|GO:0006412
Psa1g0850 134 ProSitePatterns Ribosomal protein S7e signature. 79 92 IPR000554 GO:0003735|GO:0005840|GO:0006412
Psa1g0850 134 PANTHER 40S RIBOSOMAL PROTEIN S7 2 132 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g0850 Psa-Chr1 57279303 57281341 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g0850 1 130 Cytoplasmic Ribosomal Protein Gene Family AT3G02560 81.538 3.10e-77 225
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g0850 K02993 - gmx:100527680 244.973
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa1g0850 1 57279303 57281341 Psa1g0850 1 57279303 57281341 ECH