Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g0843 ATGGCTACTAAAAGATTTTTTGATGATTCCAATGATCATGATCATGATCATGATCAAGATCAAGATCAAGATCATCCAAACGACAAAAGAATGAAACCTACTTTAGCTTCTGTAGTTGAAAAAGCAGTTAAAATGCAAAACATGCAAAACCTTTTAGCAGCTTTGGAACCTTTTCTTGCAAGAGTGGTGAGTGAAGAGGTGGATAAAGCAATAAGAAAGTCCTTTCCATGTTCCATTAATAGGTCACCTTCTTTAAGCATCCAAGCACCAAATGATCACCAATCAACCTTGCAACTCTCTTTCAACAAAAGAGTTCCCCTCAAAACTTTCACAGGTAGTAGAATACTTGACATTGAAGGTAACCCAATGAACATAATTCTTGTTGAGAAAACCAACAATAACCAAATTGTTCCAACGAGTCTTCTTTACCCTATAAAGCTAGAGATTGTTGTTCTTGATGGAGATTTTCCACTTCATGAAAAAGAGAATTGGACTAGTGAGGAATTCAATAAAAAAATAGTGAAAGAAAGATCTGGGAAGAGACCATTACTTTCCGGAGAAATGAACCTTACCATGAGAGATGGAATTGCAGCAATTGGCGACATAGAGTTCACTGATAATTCTAGCTGGATAAGGAGTAGAAAGTTCAGAGTTGCAGTGAAGGTTATTCATCATGGGAATAACCAAAGTGTTAGAATTCAAGAAGCAATAACTGAGGCTTTTGTTGTTAAGGATCATCGTGGAGAATTGTACAAAAAGCACTATCCTCCAATGCTTGATGATGATTTGTGGCGGCTAGAAAAAATAGGAAAAGATGGAGTATTCCATACAAGAATGAATTCTGAAGGAATCAAAACAGTGCAAGACTTTCTCAAATTAGCTGTTATTGATACTCATAAACTAAGAAAGATTTTGGGCATTGGGATGTCAGATAAAATGTGGGAAGTCACAATAAAGCATGCAATGACATGTGAGATGGGAAGCAAGATTTATATATACCATGAACCTCAATTTGTAATATTTCTGAATCCAATATGCAAATTAATTAAAGCTATTATCAATGGACATGAATTTTCCAGCAGAGGGTTGAGCCAAATCAATAAGAGCTACATAGACAAATTGGTTAAAGAAGCATACACAAAATGGGATGAGTTGGAGGAAATTGATGGGGTTTTAAATCATAACATTGCTTTGTTAACCCAAGGTGATCAAATTGTGAATCAAGCATCATTAGTGACAACACATGATCAGAATATTGGTAGCTATGTACCAAGCAATAAAGCACAAATGGGAGGCTCTGAATGGTCACTGAATCAAGGATTTGCTACAACATCATTTGAAAATGATTTCTCTTATGGCTTTTCAGGTTTACAATCAGATGGAGAAATGACACCTTCAGGTTCAGGACTTAGCGACGGTGATGGTGTTATGAGGCATCTTTAG 1443 0.3611 MATKRFFDDSNDHDHDHDQDQDQDHPNDKRMKPTLASVVEKAVKMQNMQNLLAALEPFLARVVSEEVDKAIRKSFPCSINRSPSLSIQAPNDHQSTLQLSFNKRVPLKTFTGSRILDIEGNPMNIILVEKTNNNQIVPTSLLYPIKLEIVVLDGDFPLHEKENWTSEEFNKKIVKERSGKRPLLSGEMNLTMRDGIAAIGDIEFTDNSSWIRSRKFRVAVKVIHHGNNQSVRIQEAITEAFVVKDHRGELYKKHYPPMLDDDLWRLEKIGKDGVFHTRMNSEGIKTVQDFLKLAVIDTHKLRKILGIGMSDKMWEVTIKHAMTCEMGSKIYIYHEPQFVIFLNPICKLIKAIINGHEFSSRGLSQINKSYIDKLVKEAYTKWDELEEIDGVLNHNIALLTQGDQIVNQASLVTTHDQNIGSYVPSNKAQMGGSEWSLNQGFATTSFENDFSYGFSGLQSDGEMTPSGSGLSDGDGVMRHL* 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g0843 480 MobiDBLite consensus disorder prediction 461 480 - -
Psa1g0843 480 PANTHER PROTEIN, PUTATIVE-RELATED 1 471 - -
Psa1g0843 480 MobiDBLite consensus disorder prediction 1 30 - -
Psa1g0843 480 Pfam Calmodulin binding protein-like N-terminal domain 97 246 IPR046831 -
Psa1g0843 480 Pfam Calmodulin binding protein central domain 258 324 IPR046830 -
Psa1g0843 480 Pfam Calmodulin binding protein C-terminal domain 329 388 IPR046829 -
Psa1g0843 480 PANTHER OS02G0177800 PROTEIN 1 471 IPR012416 GO:0005516
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g0843 Psa-Chr1 56905452 56908135 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g0843 22 390 Calmodulin-binding Proteins AT5G57580 47.200 1.25e-112 345
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g0843 - - gmx:100803213 587.8