Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g0830 ATGGATGCAGAACTTAATAGATACATATTGATGAATGAATCGAAAGGTCTTGTTGCTGGATATCCTCAATCTATGTTAGATATCTTAGGAAATTCTAATATTGCTGCTGTTCATGGTCCTGCTCATAAGTTCTTGAGAGGTGCACTTTTATCACTTGTTAGCCCACAAATGTTAAGAGATATAGTTTTGCCAAGAATTGATAGGTTTATGAGTTCTCACTTAAGTGATTGGGATGGAAAAATTATCAACCTTCAAGATCATACTAAAGAGGTGATATTCCTTTCAATTATGGATCAAATTGCAAGTATAGACCCAATGTCAAAAAGGGCTGATTATTTCAAGACACATTTTTTTAAGCTTGTTTTGGGAACACTTTCTCTACCTATTAACCTTCCTGGAACAAATTACTGCAATGGAGTTCAGGCAAGGAAGGATTTACTTAGCATGTTGAGACAAATACTAGAGGAAAGAAAAGCATCGAATGAAAGTTATAAAGACATGCTTAGTTGTTTAATGAAAACAGATGAAAATAAGTACAAACTAAATGATGATGAAATCCTTGACCTAGAACTTACACTTATGTATTCTGGTTATGAAACTGTTTCAACCACATCTATGATGGCTCTCAAGTTTCTCCATGACAATCCCAAAGCTCTTGAAGAAATTAGAAAAGAGCATTTGGCCATAAGAGAGAGGAAAAAGCCAAATGAACCAATTAATTTTGATGAACTCAAATCAATGAAGTTTACACGTGCGGTGATTTTGGAGACATCTAGATTGGCCACAGTAGTTAATGGAGTTCTAAGAAAAACCACTCATGATGTGGAACTAAATGGCTATTTAATTCCTAAAGGATGGAGAATATATGTTTTTACAAGAGAGATAAATTATGACACTTCTCAATATCATGATCCATTATCATTCAATCCATGGAGATGGATGGAGAAGAATTTGGAATCACACAATTATTTCTTCCTATTTGGAGGTGGCACTAGACTTTGTCCAGCAAAAGAGTTGGGAATCACAGAAATTTCAACTTTTTTGCACTACATTCTAACTAGATACAGGTGGGAAGAAGTAGGAGAAACTAAACTAGAGAAATTTCCTAGAGTTCAAGCACCAAATGGAATGCACATGAGATTTTCATCGTACTAA 1155 0.3463 MDAELNRYILMNESKGLVAGYPQSMLDILGNSNIAAVHGPAHKFLRGALLSLVSPQMLRDIVLPRIDRFMSSHLSDWDGKIINLQDHTKEVIFLSIMDQIASIDPMSKRADYFKTHFFKLVLGTLSLPINLPGTNYCNGVQARKDLLSMLRQILEERKASNESYKDMLSCLMKTDENKYKLNDDEILDLELTLMYSGYETVSTTSMMALKFLHDNPKALEEIRKEHLAIRERKKPNEPINFDELKSMKFTRAVILETSRLATVVNGVLRKTTHDVELNGYLIPKGWRIYVFTREINYDTSQYHDPLSFNPWRWMEKNLESHNYFFLFGGGTRLCPAKELGITEISTFLHYILTRYRWEEVGETKLEKFPRVQAPNGMHMRFSSY* 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g0830 384 Gene3D Cytochrome P450 1 383 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa1g0830 384 Pfam Cytochrome P450 127 366 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa1g0830 384 PRINTS P450 superfamily signature 196 213 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa1g0830 384 PRINTS P450 superfamily signature 252 263 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa1g0830 384 PRINTS P450 superfamily signature 325 334 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa1g0830 384 PRINTS P450 superfamily signature 334 345 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa1g0830 384 SUPERFAMILY Cytochrome P450 2 381 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa1g0830 384 PRINTS E-class P450 group I signature 185 202 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa1g0830 384 PRINTS E-class P450 group I signature 251 269 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa1g0830 384 PRINTS E-class P450 group I signature 291 315 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa1g0830 384 PRINTS E-class P450 group I signature 324 334 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa1g0830 384 PRINTS E-class P450 group I signature 334 357 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa1g0830 384 PANTHER CYTOCHROME P450 26 1 382 - -
Psa1g0830 384 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 327 336 IPR017972 GO:0005506|GO:0016705
Psa1g0830 384 PANTHER CYTOCHROME P450 FAMILY PROTEIN 1 382 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g0830 Psa-Chr1 54662819 54665557 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g0830 1 384 Cytochrome P450 AT5G38970 64.156 0.0 525
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g0830 K09590 - gmx:100818290 579.711