Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g0821 TGAAGTGTAAGAATAGTTTTGAAGTTCCCGGAAAAAACAACTCTTTGCCAAACAAATCAAGTGTTATGGAGGGTATTTTAGTTGAAGGATTTGAGGTGAGATGGAATGGTGTGGGGGAAGACAGGTGCCATGCTTGTACAAAATATGGAGGGAGATCTGGATACAACAGAGAAGAAAATGCATTTATGTGTCTCTCGAAGAGATCCGCCACATCCAAAGTTCCATCAATACAGAGAAGAAAATGCATTTATGTGTCTCTCGAAGAGATCCGCCACATCCAAAGTTCCATCAAGAACATGGAATTGGAAAAAGAAACTCATCATTGGTGTTATTTCTACTGTGTTATTGTAACACTTGTTGTCATCACATCCATTTACTTTTATAAGCGCCATAATATACACTCTCGCAACCTCTCCTTACAACCATTTAGACTTGACAGTCAACGCATTAGCAAGAGTCAAAACTTTGGAGTCGAACACTTCATCTTTAAAGATCTTTACAAGGCGACAAACAACTTTGACAAAAAACTAGGAGATGGAGGCAGTGCAGAAGTGTTTTATGACAAACTACTAGATGGGCGTGAAGTTGCAGTGAAAAGGCTTTTTAAATTCGGACTCAATAAAGAACAACTATTTCTTAAGGAAATAAATATACTAGCAAGAACTATTCATCCCAATCTCATCTTGTTATATGGTTGCACATCACTCAAAAGTCGTCGAGCTTTGATCGTCTATCCCAATCTCATCTTGTTATATGGTTGCACATCACTCAAAAGTCGTCGAGCTTTGATCGTCTATGAGTATGTTCGTAATGGATCTTTGGATGATCATCTTCATGGTGACAAAGCAACACCTAATAGTCGCCAGCAGTTCTAA 875 0.3851 KCKNSFEVPGKNNSLPNKSSVMEGILVEGFEVRWNGVGEDRCHACTKYGGRSGYNREENAFMCLSKRSATSKVPSIQRRKCIYVSLEEIRHIQSSIKNMELEKETHHWCYFYCVIVTLVVITSIYFYKRHNIHSRNLSLQPFRLDSQRISKSQNFGVEHFIFKDLYKATNNFDKKLGDGGSAEVFYDKLLDGREVAVKRLFKFGLNKEQLFLKEINILARTIHPNLILLYGCTSLKSRRALIVYPNLILLYGCTSLKSRRALIVYEYVRNGSLDDHLHGDKATPNSRQQF* 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g0821 290 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 14 244 IPR044652 -
Psa1g0821 290 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 245 285 IPR044652 -
Psa1g0821 290 Pfam Protein kinase domain 173 282 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa1g0821 290 ProSiteProfiles Protein kinase domain profile. 170 290 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa1g0821 290 Gene3D Transferase(Phosphotransferase) domain 1 243 290 - -
Psa1g0821 290 Pfam Wall-associated receptor kinase C-terminal 1 65 IPR032872 -
Psa1g0821 290 SUPERFAMILY Protein kinase-like (PK-like) 151 284 IPR011009 -
Psa1g0821 290 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 14 244 - -
Psa1g0821 290 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 245 285 - -
Psa1g0821 290 Gene3D Phosphorylase Kinase; domain 1 143 242 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g0821 Psa-Chr1 53115177 53116523 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g0821 155 284 Receptor kinase-like Gene Family AT1G25390 43.939 1.36e-23 98.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Psa1g0821 Pkinase 5.4e-09 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g0821 - - mtr:MTR_6g083020 138.272