Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g0818 ATGGACACCGCCACCAACAACAACCATCTTCGATTCCAGGATGCTGATGAAGTTATCGAAGATGCTGCTGAAACCTCCAACCTTGACCAATCCATGGGTGGTTGCGAACTTGATGATTCAAATGACAAAACCAGCGCTAATTACTACTTTGATTCTTACTCTCACTTTGGAATTCATGAAGAAATGTTGAAGGACACTGTTAGAACCAAGACATATCAAAATGTTATTTATCAGAATAGGTTTTTATTCAAGAATAAAGTAGTTCTTGATGTTGGTGCCGGAACTGGGATTTTGTCACTATTCTGTGCCAAAGCAGGTGCAGAACATGTCTATGCCGTTGAATGCTCTGATATGGCTGACATGGCAAAGCAGATAGTCGAAACTAAAGGTTACTCTAAAGTTATAACTGTTTTGAAAGGGAAGATTGAAGAGCTTGAACTTCCTGTTCCTAAAGTTGATATAATCATTTCCGAATGGATGGGATATTGCTTGTGGTTTGAGAATATGTTAAATTCTGTGCTCTATGCACAAGGGGTAAAGAAGGTATCTTGGAGGTTGCACACACTGTTTTCTGTTGAAAGTCAGAATTACTTTGATATGAAGGTTAAACAACCTGGACCTGTTACTCGTCTTCTTAGTTGTACCGATGAAAAGAAGAAGAATTATAAAGGGATGCATTTGGCTCCAATTTTTGAGGTTCCTTCTGTGAGTAGACATCCCAAAACTGGTGATTGGTACCCTAGCAATAAACCTCCTGATCCAGGACTTGGTATGCAGTCCCATCTGGTATCAACTCCTGTTGTCAGCAACCATATGTCTCCTGCTAACGCCACTGCAACCCCTGTTGTGAATGTGCCCGTAACTACTGTTGAAATCAGTTGA 882 0.4048 MDTATNNNHLRFQDADEVIEDAAETSNLDQSMGGCELDDSNDKTSANYYFDSYSHFGIHEEMLKDTVRTKTYQNVIYQNRFLFKNKVVLDVGAGTGILSLFCAKAGAEHVYAVECSDMADMAKQIVETKGYSKVITVLKGKIEELELPVPKVDIIISEWMGYCLWFENMLNSVLYAQGVKKVSWRLHTLFSVESQNYFDMKVKQPGPVTRLLSCTDEKKKNYKGMHLAPIFEVPSVSRHPKTGDWYPSNKPPDPGLGMQSHLVSTPVVSNHMSPANATATPVVNVPVTTVEIS* 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g0818 293 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 52 176 IPR029063 -
Psa1g0818 293 Gene3D Vaccinia Virus protein VP39 37 180 IPR029063 -
Psa1g0818 293 PANTHER BNAC07G50720D PROTEIN 18 178 - -
Psa1g0818 293 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 46 176 IPR025799 GO:0016274|GO:0018216
Psa1g0818 293 Pfam Methyltransferase domain 88 162 IPR041698 -
Psa1g0818 293 CDD AdoMet_MTases 88 157 - -
Psa1g0818 293 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 18 178 IPR025799 GO:0016274|GO:0018216
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g0818 Psa-Chr1 52916370 52917657 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g0818 5 177 C2H2 Transcription Factor Family AT3G12270 41.848 1.57e-34 130
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g0818 K11434 - gmx:100781777 287.345