Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Psa1g0816 | ATGATTGTCTACGAGTATGTTTCAAATGGAAGTTTGTATGACCATCTTCATGGTAACAAAGCAACATCTGAAAAACTTCCTTGGAATATTAGGATGAGGATTGCTGTGGAGACTGCAGATGCATTGAAGTATCTTCATGCTTCTACTATCGTCCACATAGATATTAAATCGAGTAATATTCTTTTAAATGCCGAATGTCATGTCAAAGTAGCAGATTTTGGACTCTCCCGCATCTTTCCAATTAATAAAAGTCGTGTTTTAACAACTCCACAAGGGACCTCCGGCTGTTTAGATCCCGAGTACAAAAAAACTGAGGAGCTTACTTATAAAAGTGATGTCTTTAGTTTTGGAGTGGTACTGATAGAGCTAATAACATGTTTGCGTGCTTATGATATCAGCAGAAAGGAGGAAGATGTCGTTCTGTACGAAATGGCTATGAAAAAATTTCAAAATCAAACTTTGACTGATATTGTGGATCATACCCTCGATTTTAATTCAGATTCCAAAGAAAATCAAATGATTAATGGTGTTGCCGAGTTAGCATTTCGGTGTCTCCAAATTTCTAGTGATATGAGACCAACCATGGAAGATGTGCTCGAAAACTTACTGAATATTCAAGGGCTGAATGAGATCCAAGCAGAAGCAGGTAGTAGTTCTAATCCTAATGATGAAATAAAGTTACTTAATAATGATCAAGCTTCACTATTCCCTAGTTAA | 717 | 0.364 | MIVYEYVSNGSLYDHLHGNKATSEKLPWNIRMRIAVETADALKYLHASTIVHIDIKSSNILLNAECHVKVADFGLSRIFPINKSRVLTTPQGTSGCLDPEYKKTEELTYKSDVFSFGVVLIELITCLRAYDISRKEEDVVLYEMAMKKFQNQTLTDIVDHTLDFNSDSKENQMINGVAELAFRCLQISSDMRPTMEDVLENLLNIQGLNEIQAEAGSSSNPNDEIKLLNNDQASLFPS* | 239 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Psa1g0816 | 238 | SMART | serkin_6 | 2 | 203 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Psa1g0816 | 238 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 50 | 62 | IPR008271 | GO:0004672|GO:0006468 | |
Psa1g0816 | 238 | PIRSF | ILK | 1 | 215 | - | - | |
Psa1g0816 | 238 | PANTHER | LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 | 2 | 233 | IPR044652 | - | |
Psa1g0816 | 238 | ProSiteProfiles | Protein kinase domain profile. | 1 | 204 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Psa1g0816 | 238 | Pfam | Protein kinase domain | 2 | 200 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Psa1g0816 | 238 | SUPERFAMILY | Protein kinase-like (PK-like) | 1 | 202 | IPR011009 | - | |
Psa1g0816 | 238 | PANTHER | LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 | 2 | 233 | - | - | |
Psa1g0816 | 238 | Gene3D | Transferase(Phosphotransferase) domain 1 | 7 | 215 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Psa1g0816 | Psa-Chr1 | 52590640 | 52593088 | Proximal |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Psa1g0816 | 1 | 206 | Receptor kinase-like Gene Family | AT1G25390 | 48.792 | 1.69e-62 | 204 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_WAK_LRK10L-1 | Psa1g0816 | Pkinase | 1.6e-31 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Psa1g0816 | - | - | mtr:MTR_6g083020 | 257.299 |