Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g0779 ATGACACCACGCACGGACGAATATGAACAAGATAACAATGACCTAAACGCCACCGACGACGATGACAGCGACGACGACGGTCTCAAAGAAGACATGGCCGCCGTCGCGCGAGCCTGTAAGTTCAAAGTAGACGAAATTCCGTCTGAAGAAGATCCTCTTTTGGCTTCTGGAGATGAAATTCCGTATGAAAAAGATCCTCTTTTGGCCTCTGGCGACGCAATTGTCCCATTCACCGGTACTGCGGACTCTGACTCTGACGGACAAAGTGACCGTGAATGTCTCAATAGAGTTAAGAGTCTCTGTCTGAATATTGATTCTATTCCTCATCTGCAGCCGGCGGCAGCTGCTTCTGACGATGATGAAGATGACATGGAAACAGTTCGCTCCATCTTCAAACGGTTTTCCGCTTATGATAGAGGTGGATGGGAAGCATGGTCTGAAGAGGATCAGACCACGGGTTTAATTGCTGAGAAGGATGTTGCCAAGTGCTCCATTTCTGACAGATCAGATGCCGGTAAAATGTGTCCTGATTCTCAATGCCTTGATAATGACAGATCAGATGCCGGTGAAATGTGTCCTGATTCTCAATGCCTTGATAATGACACCAATTTGCTGATTGATACATGTGATTTTGACGAGACTTATGAAAAAGATGCTGGATTGGCTTCTCAAGTATTGAATAAAAGATCAAGATTTCCTCCGTCGGCTCAAGCTTTTGTTGACGTCCTCTCGAAGAATAGAGCTCTCCAGCAATTTCTTAGAAGTAAGTTGATTGAAATTGAAGCAAAAATTGAAGTAAACAACAAGCTAAGGGAAAAAGTTAAAATCCTTAAGGATTTCCAGGTTTCATGCAATAGAAGAACGGGGAGTGCTTTATCAATGAAAAAGGATCCACGTGTGCAGTTAATATCATCCAAGAAGTCTTTTGCAACAAAAAAGTCAAAGAACAATAATAAGAAAGTGTCTGCAATGCGTTATGGCCCAGATGAGAATTCTCGTGTTGCTAACTATAAGATGGTATTGGAAAGATTTCCGCTCTCTTTGGATAGGAAAAAGTGGTCAAATAAGGAAAGGGAGAGTCTTTCAAAGGGAATTAAGCAACAATTCCAAGAAACAGTGTATCAAATTTCAGTTGATAGAATGGGTTCAGAGTGCTCTCCCGGAGACATAATTGATTCATTTAAAGGTCTTGAAATCACACCAGTGAGGATTAGAGCATTTTTACCTAAAGTTAAATGGGATCCATTGGCTTCTATGCATGTTACTGGCCGTACTGGTGCTGAATGTGAATCACGGTGGTTGAATTGTGAAGACCCTTTGATCAATCATGGCTCATGGACTGGTGAAGAGGATAGGTCTCTTTTGATTATTGTCCAAGAGACTGGTATCAGGAATTGGTTTGACATTGCTGCATCATTGGCCACAAACAGGACTCCATTTCAATGCTTGGCACGATACCAAAGGAGCTTAAATTCTTCGATGATAAATAGTGAATGGACTGAGGAAGAAGATGCTCAACTTTGTTCTGCTGTTGCATATTTTGGTGAGAGTAATTGGCAGTCGGTGGCTTCTGTTTTAGAACGGCGGACGGGAACCCAGTGCTCAAATAGATGGAAAAAATCAATTTGTCCTGTGAGGAAAGGAAGCTTTACACCCGAGGAGGATGAACGCCTTACAGTAGCAGTTGCGCTGTTTGGAAGGAAATGGAATCAAATAGCTAAATATGTTCCTGGCCGGATTCAATCTCAGTGTAGAGAAAGATACCTTAATAGTTTGGATCCTTCTTTGAAATGGGGTGGATGGACTGAGGAAGAGGATTTAAGATTAGAAGCTGCAATCACCAAGTATGGGTATTGCTGGTCTAAGGTGGCTGAAGACGTACCTCCCCGCACTGATTCTCAATGTCGGAAGAGATGGAAGGTGATATGTCCTGAACAAGTTCCTTTGCTACAAGAAGCAAGAAAGAGGCAAAGGTCTCTTCTTGCCAGGAACTTTGTCGATCGAGAATCAGAACGTCCAGCCCTTACACTGAATGACTTCATTCCTTTACAAATGTTAGTTCCACCATCTGATGTTGATGCTGAGAAACTCCAAAGGAAGCGGAAGAGAAAGTCGCGCGGCATTTGCAAGGAAGAGAGGTCCAAAAAACATGGAAAGGAGACTGAACTTTGTACCGTGGAAGCACGAGGCGCAGATCCCAAGAAAGAGAGGCCTAAAAGACATGCAAAAAAGAAATCATTTTATCCTGAGGATGTAGAAGATATAGTTCCCAAGAAAGAGAAGCCTAAAAGACATTTGAAGAAGGCTCGAATTTGTCCTGAGGAAGTACAATATATAACAGCATATAATGATAGGGTCAAGACTTCTGGTGTTGGTGGTGTTCCAATCTCTGCACCGAGCAATGTTCCCAAGAAAATGAGATCTAAAAGAGGTGCTAAAAAGGCTCAGCCCAAGGAAGTAGATAATATAGCATGTAGTGACGAGGTCAACACTTGTATCAAGAGTTCAGAAAGTCAAGATGGAGACAACATAACACTTGCATGCTTTTTACGCAACAAATCAAAGAAGAAACTATCTCAATGTACCAAAACCGCCAGCAATGGTTTGTCTTCCTCTAGGACAAAGTCTGTATCTAAGCAGGTTGAAAATCAAATCCCATCTGGTGAGCAAGACAGATTGTCTCTGTCATGTGGTATTGGTGGAACTAAAGATTTGTTAATGCAAACAGAAGATGATTCTAGCAGACAAGTGAGAAAACCAGAAGGTACAAATGCAACTAGAAAATCAGAGGCTGAACACAATTTGAATGGTGATGGCAATGCTATACCTCTTAAGTTCTATGTTAGAAAGAAAACAAAGAAATGGAGTCAAGTTACTGAAGGATGCCATGCTTGCTCTCCCTCCATATTGAAAAAGGGATCTACATTACTCCATGGAAACAAGCCAACCATCATTTCTAACGATAGTGAACCATCGATGTCAAAAGTTGTTGAAGAGGAGACTGTTTTAAATGGTGGTGTGGCTGAAGCTGAACCCACAAACATCAATGTTGTCGAAGAAGAGACTGTTCTGCATGGTGGTGTGCCTGAAGCTGAACCCACAAACTTC 3108 0.4212 MTPRTDEYEQDNNDLNATDDDDSDDDGLKEDMAAVARACKFKVDEIPSEEDPLLASGDEIPYEKDPLLASGDAIVPFTGTADSDSDGQSDRECLNRVKSLCLNIDSIPHLQPAAAASDDDEDDMETVRSIFKRFSAYDRGGWEAWSEEDQTTGLIAEKDVAKCSISDRSDAGKMCPDSQCLDNDRSDAGEMCPDSQCLDNDTNLLIDTCDFDETYEKDAGLASQVLNKRSRFPPSAQAFVDVLSKNRALQQFLRSKLIEIEAKIEVNNKLREKVKILKDFQVSCNRRTGSALSMKKDPRVQLISSKKSFATKKSKNNNKKVSAMRYGPDENSRVANYKMVLERFPLSLDRKKWSNKERESLSKGIKQQFQETVYQISVDRMGSECSPGDIIDSFKGLEITPVRIRAFLPKVKWDPLASMHVTGRTGAECESRWLNCEDPLINHGSWTGEEDRSLLIIVQETGIRNWFDIAASLATNRTPFQCLARYQRSLNSSMINSEWTEEEDAQLCSAVAYFGESNWQSVASVLERRTGTQCSNRWKKSICPVRKGSFTPEEDERLTVAVALFGRKWNQIAKYVPGRIQSQCRERYLNSLDPSLKWGGWTEEEDLRLEAAITKYGYCWSKVAEDVPPRTDSQCRKRWKVICPEQVPLLQEARKRQRSLLARNFVDRESERPALTLNDFIPLQMLVPPSDVDAEKLQRKRKRKSRGICKEERSKKHGKETELCTVEARGADPKKERPKRHAKKKSFYPEDVEDIVPKKEKPKRHLKKARICPEEVQYITAYNDRVKTSGVGGVPISAPSNVPKKMRSKRGAKKAQPKEVDNIACSDEVNTCIKSSESQDGDNITLACFLRNKSKKKLSQCTKTASNGLSSSRTKSVSKQVENQIPSGEQDRLSLSCGIGGTKDLLMQTEDDSSRQVRKPEGTNATRKSEAEHNLNGDGNAIPLKFYVRKKTKKWSQVTEGCHACSPSILKKGSTLLHGNKPTIISNDSEPSMSKVVEEETVLNGGVAEAEPTNINVVEEETVLHGGVPEAEPTNF 1036
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g0779 1036 MobiDBLite consensus disorder prediction 694 714 - -
Psa1g0779 1036 MobiDBLite consensus disorder prediction 12 28 - -
Psa1g0779 1036 Gene3D - 599 644 - -
Psa1g0779 1036 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 545 592 IPR017930 -
Psa1g0779 1036 CDD SANT 445 490 IPR001005 -
Psa1g0779 1036 ProSiteProfiles Myb-like domain profile. 593 643 IPR001005 -
Psa1g0779 1036 Pfam Myb-like DNA-binding domain 446 507 - -
Psa1g0779 1036 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 438 494 IPR017930 -
Psa1g0779 1036 CDD SANT 549 592 IPR001005 -
Psa1g0779 1036 Gene3D - 490 541 - -
Psa1g0779 1036 Gene3D - 440 489 - -
Psa1g0779 1036 SUPERFAMILY Homeodomain-like 419 486 IPR009057 -
Psa1g0779 1036 MobiDBLite consensus disorder prediction 909 934 - -
Psa1g0779 1036 MobiDBLite consensus disorder prediction 1 31 - -
Psa1g0779 1036 Gene3D - 544 598 - -
Psa1g0779 1036 SMART sant 546 594 IPR001005 -
Psa1g0779 1036 SMART sant 442 492 IPR001005 -
Psa1g0779 1036 SMART sant 495 544 IPR001005 -
Psa1g0779 1036 SMART sant 349 439 IPR001005 -
Psa1g0779 1036 SMART sant 597 645 IPR001005 -
Psa1g0779 1036 CDD SANT 498 540 IPR001005 -
Psa1g0779 1036 MobiDBLite consensus disorder prediction 727 748 - -
Psa1g0779 1036 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 593 647 IPR017930 -
Psa1g0779 1036 SUPERFAMILY Homeodomain-like 494 588 IPR009057 -
Psa1g0779 1036 CDD SANT 601 640 IPR001005 -
Psa1g0779 1036 SUPERFAMILY Homeodomain-like 572 643 IPR009057 -
Psa1g0779 1036 MobiDBLite consensus disorder prediction 863 889 - -
Psa1g0779 1036 PANTHER SNRNA-ACTIVATING PROTEIN COMPLEX SUBUNIT 4 20 928 - -
Psa1g0779 1036 ProSiteProfiles Myb-like domain profile. 491 542 IPR001005 -
Psa1g0779 1036 ProSiteProfiles Myb-like domain profile. 546 592 IPR001005 -
Psa1g0779 1036 MobiDBLite consensus disorder prediction 909 937 - -
Psa1g0779 1036 ProSiteProfiles Myb-like domain profile. 438 490 IPR001005 -
Psa1g0779 1036 Pfam Myb-like DNA-binding domain 600 640 IPR001005 -
Psa1g0779 1036 Pfam Myb-like DNA-binding domain 547 590 IPR001005 -
Psa1g0779 1036 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 499 540 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g0779 Psa-Chr1 49990920 49997854 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g0779 230 743 MYB-Related Transcription Factor Family AT3G18100 49.192 8.64e-169 509
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Psa1g0779 Myb_DNA-bind_6 6.8e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g0779 K09422 - gmx:100818474 995.342
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa1g0779 1 49990920 49997854 Psa1g0779 1 49990920 49997854 ECH