Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g0777 ATGGATGAATCAGCCGCAGCATCAGCAGCAGCAGCATCTGTTCCAAAATCTCTGATGGAGAATCTGTTAGGTCTTTTGAGGGTTCGTATCAAACGTGGCGTCAATCTTGCTGTTCGTGATGTTCGTAGCAGCGATCCTTATCTTGTCATCAAGATGTATAATCAGAAACTTAAGACTCGTGTGATTAAAAGGGATGTTAATCCTGAGTGGAATGAAGATCTTACTCTTTCTGTTATAGATCCTAATCACATAGTTTCATTGACTGTGTATGATCATGACACTTTTAGCAAGGATGACAAAATGGGAGACGCGGAATTTGACTTCTCTTCTTATATAGAAGCCCTGAGGATGGACGTAACCGGCCTTTCAAACGGCACCATACTCAAACGAATTCAACCAAGTAAGCACAACTGCCTTACTGAGGAGAGCCGTATCTATTATAACAGTGGAAAGATTATCCAAGATATGATTCTTAGATTGCAAAATGTGGAATGTGGTGAAGTTGAAATCAGTTTGCACTGGATTGATCTTCCTGGTTCTAAAGGTTTATGA 552 0.404 MDESAAASAAAASVPKSLMENLLGLLRVRIKRGVNLAVRDVRSSDPYLVIKMYNQKLKTRVIKRDVNPEWNEDLTLSVIDPNHIVSLTVYDHDTFSKDDKMGDAEFDFSSYIEALRMDVTGLSNGTILKRIQPSKHNCLTEESRIYYNSGKIIQDMILRLQNVECGEVEISLHWIDLPGSKGL* 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g0777 183 CDD C2_ArfGAP 23 166 - -
Psa1g0777 183 PANTHER CALCIUM-DEPENDENT ARF-TYPE GTPASE ACTIVATING FAMILY PROTEIN 14 182 - -
Psa1g0777 183 Gene3D C2 domain 20 181 IPR035892 -
Psa1g0777 183 Pfam C2 domain 24 110 IPR000008 -
Psa1g0777 183 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 20 109 IPR035892 -
Psa1g0777 183 SMART C2_3c 25 120 IPR000008 -
Psa1g0777 183 ProSiteProfiles C2 domain profile. 10 121 IPR000008 -
Psa1g0777 183 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 14 182 IPR044562 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g0777 Psa-Chr1 49502935 49504928 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g0777 56 183 C2H2 Transcription Factor Family AT1G70790 59.231 4.71e-52 162
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g0777 - - gmx:100810504 296.975