Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g0760 ATGCTTCCTCCTTCCCGAAGAGAGTTCAAGGATGTCTATGTTGTGTTTGAGTTGATGGAGTCTGACCTTCATCAAGTCATTAAGGCAAACGACGATCTTACTCCTGAGCACTATCAGTTTTTCTTGTACCAACTTCTTCGGGGCCTAAAATACACGCATACCGCTAATGTGTTTCACCGTGATTTGAAGCCGAAAAATATTCTAGCTAATGCTGATTGCAAACTAAAAATATGTGATTTTGGGCTTGCTCGAGTTTCATTTAATGATGCTCCATCAGCTATATTCTGGACTGACTATGTTGCGACTCGGTGGTATCGTGCACCTGAACTATGCGGTTCTTTTTTCTCAAAATATACTCCAGCAATTGATATTTGGAGCATTGGATGCATATTTGCAGAAATGCTTAGCGGCAAGCCATTGTTTCCTGGGAAAAATGTGGTGCACCAATTGGATCTCATGACGGATTTGCTTGGTACTCCTCCTGCTGAATCCATTTCGAGGATTCGAAATGAGAAGGCTAGAAGGTACCTTGGTAGCATGCGAAAAAAGCAACCAGTTCCATTCTCCAAAAAATTTCCAAATGTAGATCCGCTGGCTCTTAATTTGCTGGAGCGTTTACTTGCATTTGATCCTAAAGATCGCCCAACTGCTGAAGAGGCGCTATCTGATCCTTACTTTCACGGTTTATCAAATGTGGACCGTGAACCGTCCACTCAACCAATTTCAAAACTAGAATTTGAATTCGAGAGAAGAAAATTGGCCAAAGATGATGTTAGAGAGCTGATATATCGAGAGATTTTAGAGTATCATCCCCAGATGCTCCAAGAATATCTTAGTGGCGGAGAGCAAACAAGTTTCATGTATCCAAGTGGGGTTGATCGGTTCAAGCGACAGTTTGCACATCTCGAGGATAATTACGGGAAAGGTGAACGAGGCTCTCCACTGCTGAGACAGCATGCCTCGTTACCTAGAGAGCGGGTTCCTGCTCCAAAAGATGAAAATAATCATAATAATGATTGTGAAAAGCCATCCGGAACAAATCTTCATAGCCCTTCAGGTGCAACAAATTCCGGTGACTCGGATGCACAAAATGGATCGTCAAGCATGACACGATGTCTGCTAAAGAGTGCTAGCATTAGCGGTTCAAAATGTATAGATGTCAAACAAAGTAAAGATCCCAAGGAGGAGACAATTCCAGAGGACAATGATGAAGCGGTGGACGAGTTGTCGGAGAAGGTTGCTGCTCTCCTTGTTTAG 1257 0.4296 MLPPSRREFKDVYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYTHTANVFHRDLKPKNILANADCKLKICDFGLARVSFNDAPSAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMLSGKPLFPGKNVVHQLDLMTDLLGTPPAESISRIRNEKARRYLGSMRKKQPVPFSKKFPNVDPLALNLLERLLAFDPKDRPTAEEALSDPYFHGLSNVDREPSTQPISKLEFEFERRKLAKDDVRELIYREILEYHPQMLQEYLSGGEQTSFMYPSGVDRFKRQFAHLEDNYGKGERGSPLLRQHASLPRERVPAPKDENNHNNDCEKPSGTNLHSPSGATNSGDSDAQNGSSSMTRCLLKSASISGSKCIDVKQSKDPKEETIPEDNDEAVDELSEKVAALLV* 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g0760 418 SUPERFAMILY Protein kinase-like (PK-like) 9 231 IPR011009 -
Psa1g0760 418 MobiDBLite consensus disorder prediction 324 368 - -
Psa1g0760 418 SMART serkin_6 5 226 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa1g0760 418 MobiDBLite consensus disorder prediction 383 407 - -
Psa1g0760 418 Gene3D Phosphorylase Kinase; domain 1 1 272 - -
Psa1g0760 418 MobiDBLite consensus disorder prediction 324 339 - -
Psa1g0760 418 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 1 360 - -
Psa1g0760 418 Gene3D Transferase(Phosphotransferase) domain 1 21 249 - -
Psa1g0760 418 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 9 1 360 - -
Psa1g0760 418 Pfam Protein kinase domain 8 226 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa1g0760 418 ProSiteProfiles Protein kinase domain profile. 1 226 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa1g0760 418 MobiDBLite consensus disorder prediction 340 368 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g0760 Psa-Chr1 48757215 48759639 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g0760 1 416 MAP Kinase Gene Family AT3G18040 80.941 0.0 683
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Psa1g0760 Pkinase 1.5e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g0760 - - gmx:100787677 723.391