Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g0723 ATGGCAGAATTAGATCCGTCTAAGAAAGTAGCTGATAGGTATCTCAAACGTGAGGTCCTTGGTGAAGGTACCTATGGTGTCGTTTACAAAGCCATTGATACCCAGACAGGACAGACGGTTGCAATTAAGAAGATTAGGATTGGCAAGCAGAAAGAAGGGGTGAATTTTACAGCTCTTAGAGAAATCAAATTGCTTAAAGAGCTCAATGATCCAAATATAATTGAGTTGATTGATTGCTTCCCACATAAAGGGAATTTGCATCTTGTGTTTGAATTCATGGAAACAGACCTTGAAGCTGTCATAAGAGACCGAAATATTTTCCTTTCACCGGGTGATATCAAATCTTACCTTCAAATGACGTTTAAAGGTCTTGCTCATTGTCACAAAAAATGGATATTGCATAGGGATATGAAACCTAATAATTTGTTGATAGGACCTAATGGACAGCTGAAACTTGCTGATTTTGGTTTAGCACGAATATTTGGAAGCCCGGATCGCAGGTTCACTCATCAGGTGTTTGCACGGTGGTATAGAGCACCTGAGCTATTATTTGGTACAAAGCAGTATGGCCCAGGAGTAGATGTTTGGGCTGCAGCCTGTATATTTGCTGAGCTTCTTCTTCGTCGACCCTTTTTGCAGGGTTCAAGTGATATGGACCAATTAGGAAAGATTTTTGCAGCATTTGGAACTCCATCTCCTTCTCAGTGGTCTGATATGGTATACCTTCCTGATTATGTTGAATATCAATATGTGCCTGCCCCTCCTCTGCGTTCTTTATTTCCAATGGCAAGTGAGGATGCTTTAGACTTGTTGTCTAAGATGTTTACATATGACCCAAAGGAACGAATTTCAGTGCAGCAGGCATTAGAACACAGATACTTTACTTGTCCTCCTCCGCCCACAGATCCAGATAAGCTTCCAAGACCCGCCCCTAAGAAAGAAATTAAGGAGTCAGATTTGAATCCACGTGAGGGTCCCACAGTCTTATCACCTCCTAGAAAGACTAGGAGAGTAATGCCAGGGCGTGATGGTCTTGAAGGAAGTTCATTGCAAGGAGATAAGGTTGATGATACTCATTCTAACCGGAAACAGGCCGCTGGTGAAAATAATACCGGGAAGAATGATCCTGCACCAATGTCACTAGATTTTTCTATCTTTGGATTAAAGCCTCCAAATAGACCAACAATTAACAGTGCTGACAGATCACATTTAAAAAGAAAATTAGATCTAGAATTCCAGTAA 1242 0.4114 MAELDPSKKVADRYLKREVLGEGTYGVVYKAIDTQTGQTVAIKKIRIGKQKEGVNFTALREIKLLKELNDPNIIELIDCFPHKGNLHLVFEFMETDLEAVIRDRNIFLSPGDIKSYLQMTFKGLAHCHKKWILHRDMKPNNLLIGPNGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGTKQYGPGVDVWAAACIFAELLLRRPFLQGSSDMDQLGKIFAAFGTPSPSQWSDMVYLPDYVEYQYVPAPPLRSLFPMASEDALDLLSKMFTYDPKERISVQQALEHRYFTCPPPPTDPDKLPRPAPKKEIKESDLNPREGPTVLSPPRKTRRVMPGRDGLEGSSLQGDKVDDTHSNRKQAAGENNTGKNDPAPMSLDFSIFGLKPPNRPTINSADRSHLKRKLDLEFQ* 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g0723 413 Gene3D Transferase(Phosphotransferase) domain 1 95 310 - -
Psa1g0723 413 Pfam Protein kinase domain 16 294 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa1g0723 413 Gene3D Phosphorylase Kinase; domain 1 5 94 - -
Psa1g0723 413 SMART serkin_6 14 294 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa1g0723 413 MobiDBLite consensus disorder prediction 349 363 - -
Psa1g0723 413 CDD STKc_CDK7 13 295 IPR037770 GO:0005675|GO:0008353|GO:0070985
Psa1g0723 413 MobiDBLite consensus disorder prediction 306 321 - -
Psa1g0723 413 ProSitePatterns Serine/Threonine protein kinases active-site signature. 132 144 IPR008271 GO:0004672|GO:0006468
Psa1g0723 413 MobiDBLite consensus disorder prediction 399 413 - -
Psa1g0723 413 PANTHER CELL DIVISION PROTEIN KINASE 9 357 - -
Psa1g0723 413 MobiDBLite consensus disorder prediction 296 413 - -
Psa1g0723 413 PANTHER CYCLIN-DEPENDENT KINASE D-2 9 357 - -
Psa1g0723 413 SUPERFAMILY Protein kinase-like (PK-like) 10 300 IPR011009 -
Psa1g0723 413 ProSiteProfiles Protein kinase domain profile. 14 294 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa1g0723 413 ProSitePatterns Protein kinases ATP-binding region signature. 20 49 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g0723 Psa-Chr1 47022125 47028550 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g0723 4 412 Core Cell Cycle Gene Families AT1G73690 73.839 0.0 608
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CDK7 Psa1g0723 Pkinase 3.7e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g0723 K02202 - gmx:100814263 737.258