Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g0720 ATGCAGATTGTTGGCAATGTTGCAGGATCGGTGTTTTTGTACCTCACTGATTATAGTCTGCAAAAGAAAAGCCACGAGATGGCGAAAAGGGCTCTTGAGAAGAAGATAACTTTGCCGGATTTAGCCGCTGCAGATCTTGATAATGATGGATCAATCAGTAAATTGGACTTTGTCATTAGCAAACAACTTGATTCCTTAGACCATGGCATATACGGCAAGATCACTCTAGCAGACCTCATGGAAACTGTCTAA 252 0.4167 MQIVGNVAGSVFLYLTDYSLQKKSHEMAKRALEKKITLPDLAAADLDNDGSISKLDFVISKQLDSLDHGIYGKITLADLMETV* 84
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g0720 83 ProSitePatterns EF-hand calcium-binding domain. 45 57 IPR018247 -
Psa1g0720 83 PANTHER OS01G0696100 PROTEIN 10 62 - -
Psa1g0720 83 PANTHER POTASSIUM CHANNEL, SUBFAMILY K 10 62 IPR003280 GO:0005267|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g0720 Psa-Chr1 46678355 46678854 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g0720 12 81 Ion Channels AT4G18160 37.931 7.88e-12 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g0720 K05389 - gmx:100789639 93.5893