Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g0717 ATGATTCATTTTCAGACAGCAGTTTGTAATTATAACGAAACACAAGGGCATTTTCCCAACCTCGCTTCTATAAATCCTCAATCTCCCCCCACTATACAAAACCCCTCACAAACTTCCTTTTCTCTCTCTCTCTATACTCTATTGTTGCATCTTGGTCAAACAATAAAACAACACTGCAGAAGCAGCGAAAATAGCATCCTCAACGTACACAAACCTAAGCACAAACAAAAAATGTCTGCAAAATGCAGTAAAATCCGCCACATTGTGCGCCTCCGCCAGATGCTACGACGCTGGCGAAACAAAGCACGCATGTCATCAGCTAATCGTGCACCGTCGGATGTACCCGCCGGACACGTGGCAGTATGTGTCGGAACTAACTACACCAGATTTATCATGCGCGCGACCTACCTGAACCACCCCATTTTCCAGAAGCTTCTTGTTCAAGCCGAAGAAGAATACGGTTTCTCTAACCACGGTCCTCTTACCATCCCCTGCGATGAAGAATTCTTCCAAGAAGCTCTCCGGTTCATTTCCCGGTCTAGCAACGGATCGAACCGGTTTGTTAATCTCGAGTTTGAAGATTTTCAAAGACGCTGCCACGTGGGAATTAGAAGTAACGTGGATTTTTGGCCTGAATCTCGACCGCTCCTCCATGGTTTAAGTGAAAAAAATATTTGGTAG 681 0.4523 MIHFQTAVCNYNETQGHFPNLASINPQSPPTIQNPSQTSFSLSLYTLLLHLGQTIKQHCRSSENSILNVHKPKHKQKMSAKCSKIRHIVRLRQMLRRWRNKARMSSANRAPSDVPAGHVAVCVGTNYTRFIMRATYLNHPIFQKLLVQAEEEYGFSNHGPLTIPCDEEFFQEALRFISRSSNGSNRFVNLEFEDFQRRCHVGIRSNVDFWPESRPLLHGLSEKNIW* 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g0717 226 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 80 219 IPR003676 GO:0009733
Psa1g0717 226 Pfam Auxin responsive protein 90 176 IPR003676 GO:0009733
Psa1g0717 226 PANTHER SMALL AUXIN-UP RNA-RELATED 80 219 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g0717 Psa-Chr1 46536607 46537973 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g0717 80 225 Calmodulin-binding Proteins AT4G34750 50.000 3.13e-46 149
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g0717 K14488 - gmx:100782525 248.054